Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0331 ATGAGCATCGGAAGGCCTGAACCTCATGTAGCGCAACAAATTCGGCGTGACAGATTGAGAATAATCCAGAACACCTCCCAGCAGTTACAAGATTTCCCAAGCGATCTTGAACAATTATCTTTACGTCCAGGGACCACTTCTGATCTTCTTCAAGTTAGGAGTGTGAGTAATGCCAATATGCTCTACGAACCTGCTTTTAATTCATCGGATATGGTCAATTTCTCAACGGCTTCGAATCCCTTAGCTGAATCCAGCAGGCTGATGACGATGCCTCAGTTTGCTTCGTCCAGTTTTCATTCTTCTCTCCAAGAGCAATGCGAAGTACGTAACTTAGGCTATTGGAGAAACAGTGGGTCACACCAGTTATGTGATTGGATGCCTAATTATGCCTCTAGTTCTGGGACTAACGAAAGCAATCCTAATCCTAATTCCATATTTGGCGTGGAAATCAATAATGAACTCACAGGTGTACAATCGTCTTCTCTGAACAATCCGAACGTTATTATGCAGGATATAATCAAATCAGCTTCATTCAGTGGGCAAGGGTCAGAAATGATGCAACAAACTGACCATGGAATGTGGGTGGGCAACGGAAATCAACTCTTTTCGGTTCCAAACTATGGAATCCAACCAAATCAGTTGCGTCTTGGAAATCCTAATTCTTGCACTAATCGAACGATCCATAGGGATGAATCGTCGGGTCATCGAGTGAGCGACTCCAATAATCAGGGCTTATCTTTATCACTTTCGTCGAATTCACAGTGCTCAATACCTTTGAGATCTGTTTCAAATCACTCTTCCAATGCTGGAGACCGTACTGATTATCGAAATGTGGGGCCTCTGGGCCCTTTCACGGGGTATGCTACCATATTGAAGAATTCGAATTTCTTAAAGCCAGCGCAAGAGTTATTAGAAGAAATCTGTGGTCAACGCAATGAAAAACTTACGAAAGGACCTGATGTTTCTGGAGGAGTTGGTGCTTCCACTTCTGCTGACGTGGCCAATGCAACAATTGATAGTGGCGTTTGCACGAAGAATAGCAGTTTTGATGCTTCTTCGTTCTCCATGCTTCAGTGTTCTAATGGAAATGAAAATAGTGGTGATGGTGGAAACAGGAGTAGCTCTCGCCCTTTTTCTCGGCCAGATTATCAACAAAGAATGGCTAAGTTCCTGTACATGCAAGAGGAGGTTATCAGAAGATACAGGCAGCATCAGCAACAAATGCAAATGGTTATTCCATCCTTTGAGTCAGTTGCAGGTCTTAGTTCTGCTATTCCTTACATCTCCAAGACTCTCAAGTCAATATCTAGACACTTCAGATGCCTAGAAAATGCCATCTCTGATCAAGTTAAGCATATAAGAGGAGTTTTGGGAGAGGAATTATCAGCAACTAGCACTGGTGGTGCTTCACCCACCAGTGACAAACATGACATCAGCAACATTGCGCGACAGAAGTTCTTGGACCAAAGCTTTCAAAAGAACAAATTCATTGCCAGTGGTACAGGCTATGTTGAACACCAACAGCTTGCCTGGAGGCCACAACAGAAAGGCTTGCCAGAACGTGCGGTGTCAGTTCTTAGAGCTTGGTTGTTTGATCATTTTCTTCACCCGTACCCCACGGACGCTGATAAACACATGCTAGCTGCTCGAACAGGTCTAACTCGGAACCAGGTATCAAACTGGTTCATAAACGCACGAGTACGTGTTTGGAAGCCAATGGTAGAGGAAATACACATGCTTGAGACGAGAGGATTGACGATTGAGAAAGACACCCAAAATGCTGGTAAAAGCGAGGGACCTTGTGCCATTGAAGGTGGCCACCAGGCAAGAGGGGATCAACCTCTGAGAGGCAATCAATTTCAGTGTAGAGAAAGTCGTGTGGATGAGAAGGCGGTGGCGGTGGCGGAGTTAAACGCACAACAATGGAACCAAGAGAAGCGATCGAAGCTTGGATGTCACATTACGCCCAGCATGGATGGCACATTAATGGGTTTTGTTCCATACAGAAGGGCTGAGGTGGAGGTTGGGGGAGCCGGACCTGTGTCCCTAACGCTGGCTCTCAAACACGGCGACGTTGAAGCAATACAGCAACACCACCACCACCAGCTCAGTCACCACTTTGGAGGGCATGTCATCAATGACTTTGTTGGCCAATAA 2157 0.4543 MSIGRPEPHVAQQIRRDRLRIIQNTSQQLQDFPSDLEQLSLRPGTTSDLLQVRSVSNANMLYEPAFNSSDMVNFSTASNPLAESSRLMTMPQFASSSFHSSLQEQCEVRNLGYWRNSGSHQLCDWMPNYASSSGTNESNPNPNSIFGVEINNELTGVQSSSLNNPNVIMQDIIKSASFSGQGSEMMQQTDHGMWVGNGNQLFSVPNYGIQPNQLRLGNPNSCTNRTIHRDESSGHRVSDSNNQGLSLSLSSNSQCSIPLRSVSNHSSNAGDRTDYRNVGPLGPFTGYATILKNSNFLKPAQELLEEICGQRNEKLTKGPDVSGGVGASTSADVANATIDSGVCTKNSSFDASSFSMLQCSNGNENSGDGGNRSSSRPFSRPDYQQRMAKFLYMQEEVIRRYRQHQQQMQMVIPSFESVAGLSSAIPYISKTLKSISRHFRCLENAISDQVKHIRGVLGEELSATSTGGASPTSDKHDISNIARQKFLDQSFQKNKFIASGTGYVEHQQLAWRPQQKGLPERAVSVLRAWLFDHFLHPYPTDADKHMLAARTGLTRNQVSNWFINARVRVWKPMVEEIHMLETRGLTIEKDTQNAGKSEGPCAIEGGHQARGDQPLRGNQFQCRESRVDEKAVAVAELNAQQWNQEKRSKLGCHITPSMDGTLMGFVPYRRAEVEVGGAGPVSLTLALKHGDVEAIQQHHHHQLSHHFGGHVINDFVGQ 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0331 718 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 216 590 - -
Alju10g0331 718 Gene3D - 515 577 - -
Alju10g0331 718 FunFam BEL1-like homeodomain protein 9 515 577 - -
Alju10g0331 718 ProSiteProfiles 'Homeobox' domain profile. 531 572 IPR001356 GO:0003677
Alju10g0331 718 MobiDBLite consensus disorder prediction 237 273 - -
Alju10g0331 718 SMART HOX_1 512 576 IPR001356 GO:0003677
Alju10g0331 718 SMART prehox3 285 448 IPR006563 -
Alju10g0331 718 MobiDBLite consensus disorder prediction 360 380 - -
Alju10g0331 718 Pfam Associated with HOX 290 447 IPR006563 -
Alju10g0331 718 SUPERFAMILY Homeodomain-like 518 579 IPR009057 -
Alju10g0331 718 CDD homeodomain 518 573 IPR001356 GO:0003677
Alju10g0331 718 Pfam Homeobox KN domain 529 568 IPR008422 GO:0003677|GO:0006355
Alju10g0331 718 MobiDBLite consensus disorder prediction 218 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0331 Alju-ChrAlju10 2580468 2583939 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0331 380 689 Homeobox Transcription Factor Family AT4G34610 41.534 4.46e-62 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Alju10g0331 POX 1.7e-32 No_clan