Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0325 ATGCTCTGGAAACACCGTCTACCACTTGGGGTTGAACATATGGCAAATTCTACAAGTTCTTGTAGTAAGGCTAAGGCTGATGAAAATAACAATGGGAGGCGTGTCAGTGAGATAAGCCCAATCAACTCGGGCTCTTCTACGAAAGGTGCGACTGGTCCCAGAAGGTCTACGAGAGAAACCTCGTCAAAGAAGATGACTCCTAGTTGTTCAAGTACTCGAAAGTCCGAACGACTTGGAAAGAGTACATTACCAAGTCCTCTTGTCAGAAGGAAATCCCAAAGGGTTGAGAAACAGAATATGTCAAGTCCTTTGAGGAGATCTGAAAGAACTAAGAATCACTCTGATATAGCTCCTTCAGGTTCTAAGAGCTTTGACTCATTAGCTCTGAAGCGGAAAAAGAAAAAAAAACACAAGAGTGTAAAAAAATTAACATTTGAAGTTGAAAACAAAGAACGTGATGGGGGAACTTCTCAGGGAAAGAGGAAGAGAATAGATACGGATGCTCGTGCTTTCCGGGCTATGATAAAGAAAAAACCGAAGATAGATTGTCCCGAGGAGACAAATGGTAAAGATAACTTAATTCAAGAAGATTGTCTTGAGGAGACAAATGATTGTCCTGATGAGACAAATGGTAAAGATAATTTAGTTCAAGAAGATTGTCCTGAGGAGACAAATGGTAAAGATAATTTAACTCAAGGTTGTCCTGAGGAGACAAATGGTAAAGATAATTTAATTCAAGAAGGTGGCAAAATTGTTGAGGAGAAGATTGATGAGCACTTAAATGGGAGTAATTTAGATTGTGAAGAAGTTGCCAACAATGGAATACTACCATCTGATGATGCCAAGGAGCTAATTAACCTTTCTGCTATTGAGGATAGAGGTGAAACTGAAGCCACCTTGGCTGCAGAAATTTCTGAGAAAGGCGTTGACTGCTCACCTTCAAATGATGTCTCTACAGAGATCCAAGCAGATGATGGAAAAACATGTCTCATTTGCAAATGTGGCGGGCGGCTTTTATTCTGTGATGGAAAAGAATGTGATGGATGCTACCACTTTTCTTGTCTTGAACCTCCCCTGGTGGATGCTCCCCTTGGAGTTTGGCACTGTCACCTCTGCGTGAAGAAGAAGATAGAGTTAGGTGTATATTCTGTGTCTGAGGGAATAGAATCAATTTGGGATGCCAGAGAAGTCAAGGTGTCTCATGCTAATGGATGGTCAACTGAGAAACGTTTTCTTGTGAAGTATAAAGGCCTTGCTCATGTTCACAATCGTTGGGTCTCAAAATGTCAATTACTTCTTGAAGCTCCTCCATTGCTGCTTGAGAAATTTAATCAGACAGATCAGGCCCTGAAGTGGAAGCCAGAATGGAGCTTACCTCATCGGTTGCTTCAGAAGAGAGCATTAATCTTTGCCCAACAGGATGGTGATACCAGGGGTGGCCAAACTGTTGGTACGTCTGACTGTCATTGTGAATGGCTTGTTAAATGGCATGGTCTAGGTTATGAACATGCATCATGGGAGCTGGACAATGCTTCGTTTCTTCGTTCACTTGAAGGTCGGAGGCTAATTAAAGACTATGAAGATTATCATCAGAGGGCGAAAAGAGTTCCTTTATCATCCAAAGTAGATAAGAAACTAGACCACATTAGTTCTTTTAGCAAATTATATCAGACGCCTGGTGGATTTCCATCTGGATTTGGTATCAACAATTTGGATGCAGTTAACAAGTTACGTGAGCACTGGCACAAGGGTCAGAATGCTGTTGTATTTGATGACCAGGACAGAATGGTGAAAATGGTTGCATTTATCTTATCTTTGGACTCTAATACTTGTCGAGCTTTTCTCATTATCTCAACTTCAGCTTCTCTCCATTTATGGGAGGATGAGTTTTCTTGTTGGGCGCCATCTCTCAATATAATTATTTACAGTGGAAACAAAGAGATTCGTAGAAGTATTAGGAAATTAGAATTTTATGGGGAAGGTGGCTGTCTACTTTTCCAAGTACTTATAGTACTTCCAGATATCATCATTGAGGATCTAGAGGTTTTAGAAGGCATAGAATTTGAAGCAATCATAGTTGATGAGTGCCAGTGCTCAGATATCTCATCTTATTTGAAGCAAATTAAAATGTTAAAGACTGATTTGTGGATTCTTATTCTCACTGGCCAACTAAAGGACAGTGTTGTAGAATATCACGATATCCTGGCTTTTCTCGATCATCAGAGTTATGATGAAGATAATGATGATTTAATCTCCAATTCCGGTGATATTAGTCAACTAAAGGATAAGCTATCAAGTTTTGTTGCATATAAATGCAAATCAGACTCCTTTAGGTTTATTGAGTATTGGGTTCCTGTAAATATATCCAATGCACAACTTGAGCAGTATTGTGCTGCTCTACTTTCAAACTCTTCCATACTACGCTCACAATCGAAATCCCATGTTGTTGGGGCTCTTCATGACATTCTTATTACTACCCGGAAGTGTTGTAATCACCCATATCTTGTGGACGAGTCCCTTCAAAGTTTACTTATCAAGGATCTTCCACCAGCTGAGATCCTGGATGTTGGAATAAAAGCAAGTGGGAAGCTGCAACTTCTTGACTCCATGCTCATGGAATTGAAAAAACAAGGTCTAAGGGTGCTTATTCTTTTCCAGTTTTTAGGTGGTCATGGGAAGGTTTCAATTGGAGATATTTTGGATGACTTGATACGTCAAAGATTTGGTCCAGATTCTTATGAAAGAATTGACAAAGGTGTTATGACTTCGAAGAAGCAAAGTGCTCTGAAAATGTTTAATAACAAGGACCATGGGAGATTTGTATTTTTATTAGAGGCAAATGCTTGCCATCACAGCATCAAATTGTCATCAGTTGATACCATTATCATATTTGATAGTGATTGGAACCCATTGAATGACATAAGATCCCTTCAGAAATTAACACTTGATTCACAGTTGGAACAGATTAAAATATTTCGGTTATATTCATCTTTCACTGTTGAAGAAAGAGCCCTAGTCCTTGCTAAGCAGGATAGACCACTTGATAGCAAATTAGACATCAGTTGGAGTACTATTCACACATTGTTGATGTGGGGTGCATCGTCTTTATTTGATGATTTAAAAGCTTTTCATGATGCTAAAACTGATATCTTAAGTTTGAATTCCTTATCTGGACAATCATCTTTAAAACAAGCTCTACATGAATTCTCATCCATACTTGAGCAAAATGGTGAAGATAATGACACAAGGGACTGCTCATTTTTATTGAAAGTCAAGCAAAATGGATTAAAATACCACGCAAATTTTTCTTTGATTGGTGAGTGGAAATTCAAGTCACTGGATTCAGAACCATGCCACTTGTTTTGGACAAAACTTTTGGAGGGAAAATATCCTCAATGGAAATACTCATCTGTTTCATCTCAAAGGAGCCGGAAAAGGGTTCAGCTTTTTGATGGTTCAGGAAATAGGCCTGACCTTGAGAATGAAGAGGTAGTGAAAAAGGCCGCAAAACTGATGAATAATGCTGATCAGCCTTATTCAAAACGTGATGGTGAAAAATTATCTGCTGGAAACAAGGAAGGAAATTCTGGAGAATCAATGGAAATACCTCAAGGCAATGATGTTGAATTCCTGAAAGCAAGGAAATTGCGTGATGAGCAGAGAAGCTTACATCTTTCTCTGAAGTCAGAAATACCTAAGCTTTGTGAAATCCTTCATGTCCGAGATAATGTCAAGAGGATGGCCGATGAATTTCTTGAGTATGTCATGAACAACCACCGTGTGAATAGTGCTCTTCCAAAGTCAATATTGGAGGCTTTTCAAATTTCTCTGTGTTGGACTGCAGCTGCTTTGGTAAAGCACAAGATTGACCATGAAGCTTCCCTTATGCTTGCAAAACATCATTTAAAATTTCATTGTGGGAAGGATGAGGCAAATGTAATATACTCAATGTTGCGGTGTCTGAGGAATATATTCTTGCATCGAACAGGAATTTATGATGTCAATGGCTCTCCAAAAGCTTCTGCATCTGAATTATCTGGTAAGAATTATTCCTATACGGGCTTGGCACTGGAGGTTGAATTGGCTAAGAAAGATGTCTTAAAAAGCATTAAAACAATTCAAAAGAAGTGCCAAAAGAAGCGGAGGAAGTTATTTCTTAAGCATCAAGAAGAAAAGAACAAGTTGATTGCAACATATGAGGAAAAAAAGGCTGATCTTGAGAAAAAATACAAGATAGAATTAGCTGTTTTTCGGTCCTATTCTCCCAATGATGTGATGAGATCAGAAACCCTCAAGGATTTAGATATTGAGTATACTCGAAGAATTGAAGATTTGAACCATCAGCATGAAATACGTCTCAAAGATCTTGAGAGTGCCCAATTGATAGCAAGGGAAATGTTACAAAATAGTGAGGCCGCATGGGTGGAAGAAGTGAAGTCCTGGGCAGATGTTTTGTTAAACTCTCTTCATTTGAAAGAACGTGGGAATGGGATAGAACACTTGAAGACTAGTGGGCAAGCTGAGCCTGACAATGAACCAAAGAATAGATGCCTTGTGTCCAATCTTGTTACTGAAGGTACAAATTTTGATAGAATAGCTGAAGCCATGACAGGGACTGGGGTTGGATCATCTAGAACTCCTCCAGCTGAGGCTGCTAGTGCTTATGAAGGCCATGATAGAGCTCAAAATGCATGTGATAGTCGAGGGAAAATTATCTCTGTGCATTCCCATTCCAAAGAACATAATGTCAATGGAGCCACATGCATGATGAATGAAGGGGAAGGACAGAATATTTTTAATAATGGATGTGGGGAGAAAACTGTGCCTGATGGTTCGGAGAAGGATATAACTGTGGATCCTCCTCCATCCAGAAAACCAATTTCTGATGGAAGTCCATTGAATGTTTCAGATAGAGAGTTATTATCAAGACAATGTGAAAGTTCACTCTTGCCAGATCAGCAAACTTCTAATGGAGTCTCATTATGCATGCGCGATAGCCAGGTTCGAATTGAAGTGCCTGAAACTAGTAGCGGAATAGCTGAATGTTATGATGGCAGAGCACACCAAACAGATGTGGTATTGTTGGATCAAACTGCCACATCTGAGGAGCAGGAACAAATGTCGAGAACCATGAACAATAACACTTTGTCCCAGGCACTACAAGATTCACATGCCTCTTTATTAACATCCCCCAGACTGGTTGATAAAGATGCAGCAGTGGGAGAAATACAGAACTCTTCCGGACCAGTTGAAGAGGTATCTGGTCCAGTTGATGTTATTCCCACCGATCAATGTAATCCTCAGTCAGTCACGGAGCCTCGAGAGCAGCAATTACCATCCGTTGAGGCTCTTGCTTCCGACCAGGATACAGCTGGAGAAATGCAGATCTCCACTCAGCAAGTTGAGGGATTGTCTGGTCCTATTGATGCTTTGCGAGCTGATCAATTTAATAATGACCCAGTAATGGAGCTTCTAGAGCAACTGCAGCAATTACGTTCTGCAGAGCCCCTTGCTTCTTACCTGGACACTCCTGGAGAGTTGCTTAACTCTTCCCATCAAGTTGAGCCAGTATGTCGTCAAGATGATGTGGCACAAACTAATGGATTGAATCATGTGTTTGGGGAGCTTCTACAGCCGATGCAGCAATTGCCACCTGCAGAGTCCCCTAATTCCAACCACAATCCATCTATGGCAGCTGAAATTGAACCTCGGTCAAGCAATGAAGATTCTCTGTCTGGCCATGTTCCCCCTGCACCAATGGAGGTTACAAATGAGGTTGTTGTTCATCCTGCCTCAAATTCTGAACTTGATTCACATACACCTGTTGGTGCATTCAGAACGCAATCACTGGACACAAGAACTTTCTTCTCTCCTTTAGAGATCAATAATCATTTTAGACCAACAGCTGCCCAATCAATGAACAGGAGGCTTTCACCTTTGGACAACGATCCATTAAAGAATGAATTGGACAGATTACGTAAAGAATTAGAGCAAACCATGAAATGCTATGAAGATATGAAATTGCAGTTGAAATCTGATTGTGAGAGAGAACTTGAGGAAGTTCGCAGGAAGTATGATATCAAGTTGCAGCAGAGTGAGCTTGAGTTTCAACTGAAAAAGAAGAACCTGGATACAAGTCTCAACTTAGTTCAGATGAATAAGATGTGGGCAGAGGCTTTTAGGTCTAAATGCATGGATCTTAGAGCATCTGGGGTACCAGGAATGCAGCAAGATCCAAGTTTCACACAGCAGTTAGTTTGGTATTCAAGACAGCAAAGAGATATGAGGCCTCCCCTTGTTTCAAGTCCACCTCATGGGCCTCCTGCATCTACACTGCAGCATTTCGCTGCTGCTACTAGCTCTCAGACCATGGTGCCACCTCCTGTATCCGGTATGCCAACCTTCTCCCGTCCAGTTAGCCCTTCTCCCATGGTGGCGGTGCCACCTCCTGTATCCAGTATGCCGACCTTCTCCCATCCAGCGAGCCCTTCACCCATGGTGGCGATGCCACCTCCTGTATCCAGTATGCCGACCTTCTCCCATCCAGCGAGCCCTTCACCCATGGTGGTGGTGCCACCTGTATCCAGTATGCCAACCTTCTCCCGTCCAGCGAGCTCTTCACCCATGGCAGTGGTGCCACCTATATCCACTACAACAAGCTCACAGGCCATGGCGCCACCTTTACGCGCTACTTACAATGCAACCCCAAGGCCACCTCATATCACCTCCACTTTCCCATTGGCAAATCATCAAGCTGGTAGTGGGTTCCGTGCTACTCCACCCCATCTCAGACCCTCAACATCTTTGCCTGACCCTCATCTCCCTACCGCAGCACGTAGTGTGCCTAGTCAACAAGCTCCCAATAACATTCCTGCAATGCCTTCATTACCCAACCATCCTCGACCACCACTTCCAACCAATATATCTGATCCTCATAATAGAGTGCATCTGCCCTCATCATCCATGGAGCCAAGTATGGATGGTAATTGTCAACTGGGTATGAATCTGCCAAATGCTCTGTTACGTCCATCAAATGTGACATCATTGCGGCAATCTGAATTTGGCACCGCCAGGAGTGTGCAGGATGACTCTGTCCTTCCAGCTATGCCGCCCAACGTTGTCTGTTTGTCAGATGACGACTAA 7143 0.4183 MLWKHRLPLGVEHMANSTSSCSKAKADENNNGRRVSEISPINSGSSTKGATGPRRSTRETSSKKMTPSCSSTRKSERLGKSTLPSPLVRRKSQRVEKQNMSSPLRRSERTKNHSDIAPSGSKSFDSLALKRKKKKKHKSVKKLTFEVENKERDGGTSQGKRKRIDTDARAFRAMIKKKPKIDCPEETNGKDNLIQEDCLEETNDCPDETNGKDNLVQEDCPEETNGKDNLTQGCPEETNGKDNLIQEGGKIVEEKIDEHLNGSNLDCEEVANNGILPSDDAKELINLSAIEDRGETEATLAAEISEKGVDCSPSNDVSTEIQADDGKTCLICKCGGRLLFCDGKECDGCYHFSCLEPPLVDAPLGVWHCHLCVKKKIELGVYSVSEGIESIWDAREVKVSHANGWSTEKRFLVKYKGLAHVHNRWVSKCQLLLEAPPLLLEKFNQTDQALKWKPEWSLPHRLLQKRALIFAQQDGDTRGGQTVGTSDCHCEWLVKWHGLGYEHASWELDNASFLRSLEGRRLIKDYEDYHQRAKRVPLSSKVDKKLDHISSFSKLYQTPGGFPSGFGINNLDAVNKLREHWHKGQNAVVFDDQDRMVKMVAFILSLDSNTCRAFLIISTSASLHLWEDEFSCWAPSLNIIIYSGNKEIRRSIRKLEFYGEGGCLLFQVLIVLPDIIIEDLEVLEGIEFEAIIVDECQCSDISSYLKQIKMLKTDLWILILTGQLKDSVVEYHDILAFLDHQSYDEDNDDLISNSGDISQLKDKLSSFVAYKCKSDSFRFIEYWVPVNISNAQLEQYCAALLSNSSILRSQSKSHVVGALHDILITTRKCCNHPYLVDESLQSLLIKDLPPAEILDVGIKASGKLQLLDSMLMELKKQGLRVLILFQFLGGHGKVSIGDILDDLIRQRFGPDSYERIDKGVMTSKKQSALKMFNNKDHGRFVFLLEANACHHSIKLSSVDTIIIFDSDWNPLNDIRSLQKLTLDSQLEQIKIFRLYSSFTVEERALVLAKQDRPLDSKLDISWSTIHTLLMWGASSLFDDLKAFHDAKTDILSLNSLSGQSSLKQALHEFSSILEQNGEDNDTRDCSFLLKVKQNGLKYHANFSLIGEWKFKSLDSEPCHLFWTKLLEGKYPQWKYSSVSSQRSRKRVQLFDGSGNRPDLENEEVVKKAAKLMNNADQPYSKRDGEKLSAGNKEGNSGESMEIPQGNDVEFLKARKLRDEQRSLHLSLKSEIPKLCEILHVRDNVKRMADEFLEYVMNNHRVNSALPKSILEAFQISLCWTAAALVKHKIDHEASLMLAKHHLKFHCGKDEANVIYSMLRCLRNIFLHRTGIYDVNGSPKASASELSGKNYSYTGLALEVELAKKDVLKSIKTIQKKCQKKRRKLFLKHQEEKNKLIATYEEKKADLEKKYKIELAVFRSYSPNDVMRSETLKDLDIEYTRRIEDLNHQHEIRLKDLESAQLIAREMLQNSEAAWVEEVKSWADVLLNSLHLKERGNGIEHLKTSGQAEPDNEPKNRCLVSNLVTEGTNFDRIAEAMTGTGVGSSRTPPAEAASAYEGHDRAQNACDSRGKIISVHSHSKEHNVNGATCMMNEGEGQNIFNNGCGEKTVPDGSEKDITVDPPPSRKPISDGSPLNVSDRELLSRQCESSLLPDQQTSNGVSLCMRDSQVRIEVPETSSGIAECYDGRAHQTDVVLLDQTATSEEQEQMSRTMNNNTLSQALQDSHASLLTSPRLVDKDAAVGEIQNSSGPVEEVSGPVDVIPTDQCNPQSVTEPREQQLPSVEALASDQDTAGEMQISTQQVEGLSGPIDALRADQFNNDPVMELLEQLQQLRSAEPLASYLDTPGELLNSSHQVEPVCRQDDVAQTNGLNHVFGELLQPMQQLPPAESPNSNHNPSMAAEIEPRSSNEDSLSGHVPPAPMEVTNEVVVHPASNSELDSHTPVGAFRTQSLDTRTFFSPLEINNHFRPTAAQSMNRRLSPLDNDPLKNELDRLRKELEQTMKCYEDMKLQLKSDCERELEEVRRKYDIKLQQSELEFQLKKKNLDTSLNLVQMNKMWAEAFRSKCMDLRASGVPGMQQDPSFTQQLVWYSRQQRDMRPPLVSSPPHGPPASTLQHFAAATSSQTMVPPPVSGMPTFSRPVSPSPMVAVPPPVSSMPTFSHPASPSPMVAMPPPVSSMPTFSHPASPSPMVVVPPVSSMPTFSRPASSSPMAVVPPISTTTSSQAMAPPLRATYNATPRPPHITSTFPLANHQAGSGFRATPPHLRPSTSLPDPHLPTAARSVPSQQAPNNIPAMPSLPNHPRPPLPTNISDPHNRVHLPSSSMEPSMDGNCQLGMNLPNALLRPSNVTSLRQSEFGTARSVQDDSVLPAMPPNVVCLSDDD 2380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0325 2380 SUPERFAMILY FYVE/PHD zinc finger 318 376 IPR011011 -
Alju10g0325 2380 MobiDBLite consensus disorder prediction 202 243 - -
Alju10g0325 2380 PANTHER HELICASE PROTEIN MOM1 20 2190 IPR039322 GO:0031507
Alju10g0325 2380 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 780 1016 IPR027417 -
Alju10g0325 2380 Coils Coil 1986 2035 - -
Alju10g0325 2380 CDD SF2_C_SNF 848 970 - -
Alju10g0325 2380 MobiDBLite consensus disorder prediction 2293 2307 - -
Alju10g0325 2380 MobiDBLite consensus disorder prediction 2252 2312 - -
Alju10g0325 2380 Pfam SNF2-related domain 597 836 IPR000330 GO:0005524|GO:0140658
Alju10g0325 2380 SMART PHD_3 328 373 IPR001965 -
Alju10g0325 2380 Gene3D - 571 779 IPR038718 -
Alju10g0325 2380 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 608 745 IPR027417 -
Alju10g0325 2380 ProSitePatterns Zinc finger PHD-type signature. 329 372 IPR019786 -
Alju10g0325 2380 MobiDBLite consensus disorder prediction 1883 1912 - -
Alju10g0325 2380 MobiDBLite consensus disorder prediction 141 166 - -
Alju10g0325 2380 MobiDBLite consensus disorder prediction 1599 1635 - -
Alju10g0325 2380 MobiDBLite consensus disorder prediction 90 115 - -
Alju10g0325 2380 MobiDBLite consensus disorder prediction 1882 1918 - -
Alju10g0325 2380 MobiDBLite consensus disorder prediction 205 225 - -
Alju10g0325 2380 SUPERFAMILY Chromo domain-like 345 445 IPR016197 -
Alju10g0325 2380 MobiDBLite consensus disorder prediction 33 79 - -
Alju10g0325 2380 MobiDBLite consensus disorder prediction 17 166 - -
Alju10g0325 2380 SUPERFAMILY Chromo domain-like 486 528 IPR016197 -
Alju10g0325 2380 Gene3D - 443 529 - -
Alju10g0325 2380 MobiDBLite consensus disorder prediction 1171 1204 - -
Alju10g0325 2380 Gene3D - 780 1015 IPR027417 -
Alju10g0325 2380 MobiDBLite consensus disorder prediction 2278 2292 - -
Alju10g0325 2380 Coils Coil 1389 1416 - -
Alju10g0325 2380 ProSiteProfiles Zinc finger PHD-type profile. 326 375 IPR019787 -
Alju10g0325 2380 Gene3D - 1982 2063 - -
Alju10g0325 2380 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 866 1029 IPR001650 -
Alju10g0325 2380 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 266 380 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0325 Alju-ChrAlju10 2501747 2522577 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Alju10g0325 SNF2_N 7.8e-08 CL0023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju10g0325 10 2501747 2522577 Alju10g0325 10 2501747 2522577 ECH