Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0303 ATGTCCGATACACGGCGGAGCAGGCAACAACTGATCCGAGAGTGCCCTATTCTTGCCAACATCGAACCCAAGCAGATCAAAATTTGGTTCCAAAATCGCAGGTGTAGAGAGAAGCAGAAAAAGGAGTCAGGGCAGCTTCAGACTGTGAACAGAAAACTGTCTGCGATGAACAAGTTGTTGATGGAGGAAAATGAGCGGTTGCAAAAGCACGTTTCCCAACTAGTATGCGAAAATGGGTTTATGAGGCAGCAATTGCATAGTGCGTCAGCAGCAACTACTGATGCGAGTTCTGATTCGGGGGTCACCACACCTCAGCACTCCTTGAGAGATGCCAATAACCCTGCTGGACTCGTATCAATTGCAGAGGAGACCTTGGCAGAGTTTCTTTCAAAGGCTACGGGAACTGCTGTTGATTGGGTCCAGATGCCTGGGATGAAGCCTGGTCCGGATTCTGTTGGGATCTTTGCCATTTCGCAAAGTTGCAGTGGAGTGGCGGCTCGAGCATGTGGTCTTGTTAGTTTAGAACCTACAAAGATTGCGGAGATCGTAAAAGATCGTCCATCTTGGTTTCGGGACTGTCGAAGTCTTGAAGTATTCACAATGTTCCCTGCCGGCAATGGTGGGACAATTGAACTGTTGTACACTCAGACATATGCTCCAACTACATTGGCTCCTGCCCGGGATTTCTGGACTCTGAGATACACTACAAGTTTGGACAATGGAAGTCTTGTGGTTTGTGAGAGATCACTGTCTGGTTCAGGTGCTGGTCCTAACGCTGCAGCGGCTGCTCAGTTTGTTAGAGCTGAAATGCTCCCCAGTGGCTACCTGATTCGACCATGTGAAGGAGGAGGATCAACCATCCATATTGTTGACCACTTAAATCTCAAGGCATGGAGTGTGCCAGAGGTGCTGAGACCACTTTATGAATCATCAAAAGTGGTTGCTCAGAAAATGACAATTGCGGCACTACGCTATGTGAGGCAAATAGCTCAGGAAACAAGTGGTGAAGTTGTTTATGGTTTAGGTAAGCAGCCTGCTGTTCTGCGAACTTTCAGCCAAAGGCTGAGCAGAGGCTTCAATGACGCCGTCAATGGATTTAATGATCATGGCTGGTCCATAATGAACTGTGATGGTGCTGATGATGTGATTATTGCAGTCAACTCAACCAAGAATCTGACTTCCACTTCTAATCCTGCAAGTTCCCTAACATTCCTTGGAGGAGTTCTCTGCGCAAGAGCTTCCATGTTGCTCCAGAATGTTCCTCCAGGAGTTTTGGTTCAGTTTCTGAGGGAGCACCGCTCTGAGTGGGCTGATTTCAATGTTGATGCCTATTCTGCTGCATCACTTAAAGCAGGCGCGGCCTTTGCCTATCCTGGCATGAGGTCAGCTAGATTCACGGGAAGTCAAATTATCATGCCTCTTGGCCATACAATTGAACATGAGGAGATGCTTGAAATTGTTCGTCTTGAAGGTTTTGCTCAGGAAGACGGTTTTGCTTCTAGGGACATTCATCTCTTACAGATATGTAGTGGGATTGATGAAAATGCTGTTGGGGCATGTTCTGAGCTCGTATTTGCTTCAATTGATGAAATGTTCCCCGATGATGCTCCATTGTTGCCCTCGGGTTTCCGCATCATCCCATTGGATTCAAAATCAGGTGATAAGAAGGATGCGGTATCTGTAAGTCGGACCCTAGAACTAACATCTGGTCTTGAAGTGGGCCCAACAACAAATCATGCTGCACGAGATGCTTCATCATGCCAAAGTACTCGGTCGGTGCTGACTATTGCCTTTCAGTTTCCTTTTCAGAGCAGCTTGCAGGAAAATGTTGTGGTCATGGCACGACAGTATGTACGCAGTGTGATTTCATCTGTGCAGAGGGTTGCCTTGGCTATATCTCCTTCTGGTATAAGCCCACCTGTGGGACCAAAACTCAGTCCGGGCTCTCCTGAAGCAGTTACTCTAGCTCAATGGATATACCGGAGTCATAGTTTCTATGTGGGAGCAGAATTATTGAGATCGGATGCTCTTGTCAGTGATTCAATACTGAAACATTTATGGCATCATCAGGATGCCATTTTGTGTTGTTCAGTGAGGTCCGTTCCTGTGTTCATCTTTGCAAACCAGGCGGGCCTTGACATGCTGGAAACAACACTAGTAGCTCTGCAAGATATCACATTGGATAAAATATTTGACGACCCTGGACGCAAGGCATTGTATACAGAATTCGCCAAGTTGATGCAGGAGGGGTTTGCTTATCTGCCTGCTGGAATTTGCATGTCGATGATGGGGCGGCATGTTTCGTATGAACAAGCACTTGCATGGAAAGTTCTTGCTGAAGATAACAGTGTTCATTGCTTGGCATTCTCTTTCATAAATTGGTCATTTGTATGA 2394 0.4666 MSDTRRSRQQLIRECPILANIEPKQIKIWFQNRRCREKQKKESGQLQTVNRKLSAMNKLLMEENERLQKHVSQLVCENGFMRQQLHSASAATTDASSDSGVTTPQHSLRDANNPAGLVSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEIVKDRPSWFRDCRSLEVFTMFPAGNGGTIELLYTQTYAPTTLAPARDFWTLRYTTSLDNGSLVVCERSLSGSGAGPNAAAAAQFVRAEMLPSGYLIRPCEGGGSTIHIVDHLNLKAWSVPEVLRPLYESSKVVAQKMTIAALRYVRQIAQETSGEVVYGLGKQPAVLRTFSQRLSRGFNDAVNGFNDHGWSIMNCDGADDVIIAVNSTKNLTSTSNPASSLTFLGGVLCARASMLLQNVPPGVLVQFLREHRSEWADFNVDAYSAASLKAGAAFAYPGMRSARFTGSQIIMPLGHTIEHEEMLEIVRLEGFAQEDGFASRDIHLLQICSGIDENAVGACSELVFASIDEMFPDDAPLLPSGFRIIPLDSKSGDKKDAVSVSRTLELTSGLEVGPTTNHAARDASSCQSTRSVLTIAFQFPFQSSLQENVVVMARQYVRSVISSVQRVALAISPSGISPPVGPKLSPGSPEAVTLAQWIYRSHSFYVGAELLRSDALVSDSILKHLWHHQDAILCCSVRSVPVFIFANQAGLDMLETTLVALQDITLDKIFDDPGRKALYTEFAKLMQEGFAYLPAGICMSMMGRHVSYEQALAWKVLAEDNSVHCLAFSFINWSFV 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0303 797 CDD START_ArGLABRA2_like 114 330 - -
Alju10g0303 797 Pfam MEKHLA domain 654 796 IPR013978 -
Alju10g0303 797 Pfam Homeodomain 5 39 IPR001356 GO:0003677
Alju10g0303 797 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 7 797 IPR044830 GO:0003700
Alju10g0303 797 Coils Coil 46 77 - -
Alju10g0303 797 MobiDBLite consensus disorder prediction 87 109 - -
Alju10g0303 797 Gene3D - 154 335 IPR023393 -
Alju10g0303 797 ProSiteProfiles START domain profile. 110 338 IPR002913 GO:0008289
Alju10g0303 797 CDD bZIP 33 69 - -
Alju10g0303 797 SUPERFAMILY Bet v1-like 119 331 - -
Alju10g0303 797 Pfam START domain 120 328 IPR002913 GO:0008289
Alju10g0303 797 SUPERFAMILY Homeodomain-like 7 42 IPR009057 -
Alju10g0303 797 CDD homeodomain 4 41 IPR001356 GO:0003677
Alju10g0303 797 Gene3D - 3 45 - -
Alju10g0303 797 SMART START_1 119 329 IPR002913 GO:0008289
Alju10g0303 797 ProSiteProfiles 'Homeobox' domain profile. 1 40 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0303 Alju-ChrAlju10 2320087 2325645 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0303 8 797 Homeobox Transcription Factor Family AT5G60690 79.449 0.0 1319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Alju10g0303 START 1.1e-48 CL0209
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju10g0303 10 2320087 2325645 Alju10g0303 10 2320087 2325645 ECH