Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0301 ATGGCGATGGCTGTGGCCCACCACAGAGAAAGCAGCACCGGGAGCATCAGCAAGCACCTTGATTCGGGCAAGTATGTCCGATACACAGCAGAGCAGGTTGAAGCGCTCGAACGCGTTTACACTGAGTGCCCGAAGCCCAGCTCCTTGCGAAGGCAACAGCTGATCCGAGAGTGCCCTATTCTTGCCAACATCGAACCCAAGCAGATCAAAGTTTGGTTCCAAAATCGAAGGTGCAGAGAGAAGCAGAGAAAAGAGGCGGGACGGCTCCAGACGGTGAACAGGAAACTGACAGCGATGAACAAGTTATTGATGGAGGAAAATGAGCGGTTGCAAAAGCAGGTTTCCCAACTAGTATGCGAAAATGGATTCATGAGGCAGCAACTGCATACTGCGTCAGGAGCAACTACTGATGCAAGTTGTGATTCGGTGGTTACCACTCCTCAACACCCCATAAGAGATGCCAATAATCCTGCTGGACTCCTGTCAATTGCAGAGGAGACCTTGGCAGAGTTCCTTTCAAAGGCTACCGGAACTGCTGTTGATTGGGTCCAGATGCCTGGGATGAAGCCTGGTCCGGATTCTGTTGGGATCTTTGCCATTTCGCGAAGTTGCAGCGGAGTGGCAGCTCGAGCATGCGGTCTTGTTAGTTTAGAACCTACAAAGATCGCGGAGATCCTAAAAGATCGTCCATCTTGGTTCCGGGATTGCCGGAGTCTTGAAGTATTCACAATGTTCCCTGCCGGCAATGGTGGGACAATCGAACTCATTTACACACAGACATATGCTCCAACTACACTGGCTCCTGCCCGGGATTTCTGGACTCTTAGGTACGCTACAAGTTTGGACAATGGAAGTCTTGTGGTTTGTGAGAGATCACTGTCTGGTTCAGGTGCTGGCCCTAATGCAGCGGCCGCAGCTCAGTTTGTGAGAGCTGAAATGCTCCCAAGCGGCTACCTGATTCGACCATGTGAAGGTGGAGGATCAATCATTCATATTGTAGATCACTTAAACCTCGAGGCATGGAGTGTGCCAGAGGTTCTTAGACCCCTTTATGAATCATCAAAAGTGGTGGCTCAAAAAATGACAATTGCAGCGCTACGCTATATTAGGCAAATCGCTCAGGAAACTAGTGGCGAAGTTGTTTATGGTTTAGGCAGACAACCAGCTGTTCTGCGAACTTTCAGCCAAAGACTAAGCAGAGGCTTCAATGACGCTGTCAATGGATTTAATGATGACGGCTGGTCCATAATGAATTGTGATGATAGTGCTGAGGACGTGGTTATTGCAGTCAACTCAACCAAGAATCTCAGTGCCACTTCTAATCCTGCAAGTTTCCTAACATTCTCTGGAGGAGTCGTCTGTGCAAAAGCTTCCATGTTGCTCCAGAATGTTCCTCCGGCAGTCTTGGTTCGGTTTCTGAGGGAGCATCGCTCTGAGTGGGCTGATTTCAATGTTGATGCCTACTCTGCTGCATCCCTTAAAGCAGGCTGCTTTGCCTATCCTGGGATGAGGTCAACTAGATTCACTGGAAGTCAAATTATCATGCCTCTTGGGCATACAATTGAGCATGAAGAGATGCTTGAAGTTGTTCGACTCGAAGGCCACTCTCTAGTTCAGGAGGATTCTTTTGCTTCAAGGGACATTCATCTCTTACAGATATGTAGTGGGATTGATGAAAATGCTGTTGGGGCTTGTTCTGAGCTTGTATTTGCTTCCATCGATGAAATGTTCCCTGATGATGCTCCATTGTTGCCATCTGGTTTCCGCATCATCCCATTGGATTCAAAATCAGGTGATAAGAAGAATGCAGTATCTGTAAATCGGACCCTAGACTTGACATCCGGTCTTGATGTGGGCCCAGCAACAAATCATGCTGCAGAAGATGCATCATCATGCCATAATACTCGGTCGGTGTTGACTATTGCCTTCCAGTTTCCCTTTGAGAGCAGCTTGCAGGAAAACGTTGCAATTATGGCACGGCAGTATGTGCGCAGTGTGATTTCATCTGTGCAGAGGGTTGCCTTGGCTATATCTCCCTCTGGTATAAGCCCAACTGTGGGACCAAAACTCAGTCCCGGCTCTCCTGAAGCAGTAACTCTAGCTCACTGGATATGCCAGAGTTATAGTTTCTATATGGGAGCAGAATTACTGCAATCCGATTCTCTTGTTGGCGATTTGTTGCTGAAACAACTATGGCTTCATCAGGATGCCATTTTGTGTTGCTCAGTGAGGTCCATGCCTGTGTTCATCTTTGCAAACCAAGCAGGGCTTGACATGCTAGAAACAACCCTGGTAGCTCTGCAAGATATCACATTGGATAAAATATTTGACGACAATGGACGCAAGGCATTGTGTACAGAATTCGCCAAGTTGATGCAGGAGGGTTTTACTTCTCTGCCTGCCGGAATTTGCATGTCCATGATGGGACGGCATGTTTCGTATGAACAAGCTCTCGCATGGAAAGTTCTTGCTGAAGATAACAGTGTTCATTGCTTAGCTTTCTCTTTCATAAATTGGTCATTTGTGTGA 2529 0.4757 MAMAVAHHRESSTGSISKHLDSGKYVRYTAEQVEALERVYTECPKPSSLRRQQLIRECPILANIEPKQIKVWFQNRRCREKQRKEAGRLQTVNRKLTAMNKLLMEENERLQKQVSQLVCENGFMRQQLHTASGATTDASCDSVVTTPQHPIRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISRSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNGGTIELIYTQTYAPTTLAPARDFWTLRYATSLDNGSLVVCERSLSGSGAGPNAAAAAQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQKMTIAALRYIRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSIMNCDDSAEDVVIAVNSTKNLSATSNPASFLTFSGGVVCAKASMLLQNVPPAVLVRFLREHRSEWADFNVDAYSAASLKAGCFAYPGMRSTRFTGSQIIMPLGHTIEHEEMLEVVRLEGHSLVQEDSFASRDIHLLQICSGIDENAVGACSELVFASIDEMFPDDAPLLPSGFRIIPLDSKSGDKKNAVSVNRTLDLTSGLDVGPATNHAAEDASSCHNTRSVLTIAFQFPFESSLQENVAIMARQYVRSVISSVQRVALAISPSGISPTVGPKLSPGSPEAVTLAHWICQSYSFYMGAELLQSDSLVGDLLLKQLWLHQDAILCCSVRSMPVFIFANQAGLDMLETTLVALQDITLDKIFDDNGRKALCTEFAKLMQEGFTSLPAGICMSMMGRHVSYEQALAWKVLAEDNSVHCLAFSFINWSFV 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0301 842 Gene3D - 198 379 IPR023393 -
Alju10g0301 842 CDD bZIP 76 115 - -
Alju10g0301 842 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 20 842 IPR044830 GO:0003700
Alju10g0301 842 ProSiteProfiles START domain profile. 153 381 IPR002913 GO:0008289
Alju10g0301 842 SUPERFAMILY Bet v1-like 408 597 - -
Alju10g0301 842 Gene3D - 17 88 - -
Alju10g0301 842 ProSiteProfiles 'Homeobox' domain profile. 19 83 IPR001356 GO:0003677
Alju10g0301 842 Pfam Homeodomain 24 82 IPR001356 GO:0003677
Alju10g0301 842 Coils Coil 89 120 - -
Alju10g0301 842 SUPERFAMILY Bet v1-like 162 374 - -
Alju10g0301 842 SMART START_1 162 372 IPR002913 GO:0008289
Alju10g0301 842 SUPERFAMILY Homeodomain-like 22 86 IPR009057 -
Alju10g0301 842 FunFam Homeobox-leucine zipper protein REVOLUTA 24 79 - -
Alju10g0301 842 CDD homeodomain 24 84 IPR001356 GO:0003677
Alju10g0301 842 Pfam MEKHLA domain 699 841 IPR013978 -
Alju10g0301 842 Pfam START domain 163 370 IPR002913 GO:0008289
Alju10g0301 842 CDD START_ArGLABRA2_like 157 373 - -
Alju10g0301 842 SMART HOX_1 21 87 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0301 Alju-ChrAlju10 2310270 2316057 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0301 1 842 Homeobox Transcription Factor Family AT5G60690 81.272 0.0 1433
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Alju10g0301 START 2.8e-48 CL0209