Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0286 ATGAGTGCAGAGCAAAAGCCAGTGAGTGAAGGACAAGATGCGGTTTCTTGTCAAAGGACAGCTTCTCATCCAGTTCACAAGGTTGATGATACAATGGGAATAAGTGAAGAGTCCACACATACTCGTCGCTGGAAGAGAGAAAATCTTTCACTACAAATACCCTCAAGAACATCAGAAGAGTCTTCTCAAGATTTTGTAACAATCAAGATGCTTCAAACCCCAAGTCCTACCCCAACTCCCAAGAGAGTGAATTTTCTGAAGACTTCTCTCTCTGTTGATACCTCCATTAATAAGTCTCCAGGACCTTCAACGTCAAGAGGAAGGCCATCCATAAGAAGTCTCTTACCAAAACTGAACTTTATTTCTCGGCCGTCATCAGACGTTGAAAAAGGTTCTACTGCAGCTTCTGAAGGTTACTCTTCAGCCACTCGAGAAAAGCCTTCAATCTCAAGAACCTTGTCCCTTTCTAAACTATTTACTCCCAGGATTAAGAGGACCTCTTCCTTGCCAGTGGATGATTTTGCACATTCAAATTCAGAATCTGCTCATGCCGGAACTGTTGGCTCTGCTATGCAGAGAAGCTCTGCTCAGAGGCAGATGGTTCGCTCTCTTTCGGTGCCTGTCAACAATAAAGAGAAAAGCTTGAGGAGAATGGATTCATTTTTCCGTATTGTTCCTTCCACCCCACGAGTGAAGGATGGAATTGAATTATCGACAGCATCCCCTTCAAAGGATTCTGAAAACGATGTTGCCGATGGTGAAGATATAGCCGAAGAAGAGGCTGTATGTAGAATTTGTATGATTGATCTATGTGAAGGGGGTGAAACTTTCAAGCTGGAATGCAGCTGCAAAGGGGAACTTGCTCTAGCACACCAAGAATGTGCTATTAAGTGGTTTAGCATGAAAGGAAATAAAACATGTGATGTATGCAAGAAGGAGGTTAGGAACTTACCAGTCACTCTTCTGCGGATTCAAAGTGTCCGGGCTCGACATACTGGAACAAGCAGGTCTCATCTGGACAATGTGAATGAATATAGGGTTTGGCAAGAAGTGCCTGTTCTAGTCATTGTCAGCATGCTTGCCTATTTCTGTTTTCTTGAGCAGCTATTGGTTGGAAAACTGGGTACTAATGCAATTGCCATGTCTCTTCCGTTTTCATGCGTATTGGGTCTTCTCTCTTCCATGACATCATCCACAATGGTGAAGAGCAGGTTCGTCTGGATTTATGCATCAGCACAGTTTGCTCTGGTGGTTCTCTTTGCTCATATATTTTACTCCTTGGTACTTGCGAAAGATATACATGTGCAGGCAATACTGTCAATACTTCTTGCAACCTTCGCAGGGTTTGGTGTGGTAATGAGTGGAAGCTCAATTCTTGTTGAGTTCTTCAGATGGAGAAGAAGATGGCAGGCTTTATCAGAACAGAATAATAATAATGGTGCTCAAGTGATGGCAACTCATCCAGGCTCTTCCACAGCCAGGGCAGCACAGAATCACCAAAACTCAAGTCAGATATTGTCACAGGCTAATAATGAGAGTGCTTCTTCATAA 1551 0.4326 MSAEQKPVSEGQDAVSCQRTASHPVHKVDDTMGISEESTHTRRWKRENLSLQIPSRTSEESSQDFVTIKMLQTPSPTPTPKRVNFLKTSLSVDTSINKSPGPSTSRGRPSIRSLLPKLNFISRPSSDVEKGSTAASEGYSSATREKPSISRTLSLSKLFTPRIKRTSSLPVDDFAHSNSESAHAGTVGSAMQRSSAQRQMVRSLSVPVNNKEKSLRRMDSFFRIVPSTPRVKDGIELSTASPSKDSENDVADGEDIAEEEAVCRICMIDLCEGGETFKLECSCKGELALAHQECAIKWFSMKGNKTCDVCKKEVRNLPVTLLRIQSVRARHTGTSRSHLDNVNEYRVWQEVPVLVIVSMLAYFCFLEQLLVGKLGTNAIAMSLPFSCVLGLLSSMTSSTMVKSRFVWIYASAQFALVVLFAHIFYSLVLAKDIHVQAILSILLATFAGFGVVMSGSSILVEFFRWRRRWQALSEQNNNNGAQVMATHPGSSTARAAQNHQNSSQILSQANNESASS 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0286 516 CDD RING_CH-C4HC3_MARCH 263 311 - -
Alju10g0286 516 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 249 318 IPR013083 -
Alju10g0286 516 PANTHER OS02G0165000 PROTEIN 23 480 - -
Alju10g0286 516 MobiDBLite consensus disorder prediction 480 516 - -
Alju10g0286 516 MobiDBLite consensus disorder prediction 174 203 - -
Alju10g0286 516 MobiDBLite consensus disorder prediction 1 19 - -
Alju10g0286 516 SMART ringv_2 262 311 IPR011016 GO:0008270
Alju10g0286 516 MobiDBLite consensus disorder prediction 125 147 - -
Alju10g0286 516 MobiDBLite consensus disorder prediction 23 49 - -
Alju10g0286 516 Pfam RING-variant domain 263 310 IPR011016 GO:0008270
Alju10g0286 516 SUPERFAMILY RING/U-box 259 314 - -
Alju10g0286 516 MobiDBLite consensus disorder prediction 1 62 - -
Alju10g0286 516 MobiDBLite consensus disorder prediction 93 110 - -
Alju10g0286 516 ProSiteProfiles Zinc finger RING-CH-type profile. 255 317 IPR011016 GO:0008270
Alju10g0286 516 MobiDBLite consensus disorder prediction 93 147 - -
Alju10g0286 516 MobiDBLite consensus disorder prediction 233 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0286 Alju-ChrAlju10 2216277 2219776 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0286 249 317 C3H Transcription Factor Family AT2G37950 42.857 2.28e-13 67.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0186 02 1492965 1497598 Alju10g0286 10 2216277 2219776 CCT