Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Alju10g0284 | ATGGCGGAAACTGGAAATACTGAACTTTCACTTTCACCCTCTAAAACCCTAAACCCTTCTGATCCAATCAACGGTTCTCACTCGCCCCAATCGCCCGCTGAAAACGCTCAAATCCATCAGGAATCTTCGTCTCCCGCTCCCCAGCCTTCCGACGACGTCGTCTCGGGCGAGAAACGGAAGCGAGAGGACTCAGACACGGGGGTGTCAGATCCTTCCCTCAACCCCTTGTTGAAAACTAGCCTCTGTTCTTATTTCCGGCGACACGATGGCTCCTGCAGCCACGGGAGTGAGTGCCGCTATGCCCATGGTGAAGAGGAGCTTCGGCCTCGGCCCGATAACACCTGGGACCCTACGTCTGAGCGGGCGAAGAAGGTGATGAAATCCGAGACCGGTGATAAATGTGCAGTTTCCATGGGTGTAATGATGACTGAGGCTGTGGTCGATGATGCTGATGGCGAGGACAATGATAATTCCAATCACGCTCTTAGCAAATGCTTGGTGCATTTGCCGAGGAAGTGGGGTTCGGACAACTTGAGGGGATTTCTCAATCAAGAGGGTATACCTTTTAAATCTGCAAAGAAAAAGAAAGGCATGCTGGTAGGATTTGTCACTTTTGAAGATCAGGAACAGTTGAAGAGCTCAACAAAGGAGCTGGAAGGCAAATTAATTGGCAGCAGAAGTTTAAAAGTTGCAGATGTCATTCCTCGATCATTTGAAAAGAAATCAAATGTTACTCTTTGTGTAGATTCTGCACAAAATGCAGATGCTGCATTAGCTAAGGAGAATACAGATGAGAATGTGGATAGTGAGACAAATGGTGCAAATTTGGTGGTTGGTGATTCCATGCCGAAGACAAGAAGCCTCCGAGACGTAGTGACTCCTCTTGCTCATATGGCCTATGCTGATCAGTTAGAGCACAAAAAAGGCTCTCTCACACAGATCCTCAAAAGACTTACTAGAAATGCTCGCAAAGCTTGTCCAAGTGGCGTTTCTCTTCCTGAGTGGATTCTCAAGTCTAGGGACATAGGCGGCCTTCCTTGCAAACTAGAAGGTATTATTGGATCGCCAAGGGTAAATGGATATCGCAACAAGTGTGAATTTTCTGTTGGATATTCTGTAGAAGGAAAAGTAACAGTAGGATTCATGCTAGGAAATTTCAGGGAGGGTGTAACAGCAGTTGAGGAAGCTGGGGACTGCCCCAATGTTTCAACAATTGCTCTCCAGTATGCTTCTATCCTTCGGGAATTTCTGCAGCAGTCACAGTTACCAGTCTGGAACAGATTTAAGAATAGCGGGTTTTGGCGTCAATTGACAGTTCGAGAAGGAAGGACAGATGGGAAGGTTGCTGATGCTGAAGATTTTGGTGGTATTGTAGAGGTCATGCTTATTGTGCAGGTTTCTACAAAGGGCTTTGATAATGAGCTAGTAACCGGTGAGTTTGAGAAACTTGCTCAAGCATTTGTTGCAGGAGCTAATGCATGTTCTCCATCATCGCCTCTCACGGCTCTGGTTGTACAGGATCACCAAGGAATATCCAATGTAGCACCAGCTGATGCCCCCCTGCGGTCACTTCTCACTCCTAAAGCAGTCGGTGATCAAATAAGTGAAAATGATGCCATGGATTTTAGGATCCATGATTATATCAGCAATCTCAAGTTTTCAATATCTCCGACTGCATTTTTCCAGGTCAACACTCTAGCTGCTGAGAAGTTGTACTCACTTGCTGGAGATTGGGCATGCTTAGGTCCTGATACGTTGCTATTTGATATATGCTGTGGGACAGGAACAATTGGCCTGACCTTAGCACATCGTGTTGGTATGGTGATTGGTGTTGAAATGAATGCTTCTGCAGTATCTGATGCTCAAAGGAACGCTGAGATTAACGGTATAAAGAATTGTAGATTTATATGTGCAAAGGCCGAGGATGTGATGGGATCGTTGTTAAAGGAGCACCTAAATAAGCCTAATGAACAAGTTAATGTTCCTAGTATCTGTGGAACTGATGTTGAGGAAATTTCCGAGGGGAGTACATGCCCTGAAACTGAAAATGGTGAACAAGAATCTCAGTGTTCTGAAAATGGCAGGCAAGAAGATGAAATTGCGGCTCAGAGAGGGAGCGATTGTGAAAATGGAAATTCTTTGATGCAACAATTTAAAAATGTTGTTGCTATTGTTGACCCTCCACGCGCTGGACTCCATCCAACTGTGATCAAAGCTCTGAGGACTAATGAAGGACTGCGGAGGCTTGTCTACATATCCTGTAATCCTGAGAGTTTGGTGGCAAATGCTATTGAACTTTGCACTCCATCTCCTGCGAAAATGGAAAAAGGAAATAAAGACAACAGAGGATGGAGAAACATGAGCAGTGCTGGTCTTGCAAGACACAGAGCCAAGTCTATGCCTATCTCAGAGGCCTTCCAACCCATAAAAGCCATGGCCATTGATCTATTCCCACATACTGAACACTGTGAACTGGTGATGCTCCTCGAGAGGTAG | 2496 | 0.4559 | MAETGNTELSLSPSKTLNPSDPINGSHSPQSPAENAQIHQESSSPAPQPSDDVVSGEKRKREDSDTGVSDPSLNPLLKTSLCSYFRRHDGSCSHGSECRYAHGEEELRPRPDNTWDPTSERAKKVMKSETGDKCAVSMGVMMTEAVVDDADGEDNDNSNHALSKCLVHLPRKWGSDNLRGFLNQEGIPFKSAKKKKGMLVGFVTFEDQEQLKSSTKELEGKLIGSRSLKVADVIPRSFEKKSNVTLCVDSAQNADAALAKENTDENVDSETNGANLVVGDSMPKTRSLRDVVTPLAHMAYADQLEHKKGSLTQILKRLTRNARKACPSGVSLPEWILKSRDIGGLPCKLEGIIGSPRVNGYRNKCEFSVGYSVEGKVTVGFMLGNFREGVTAVEEAGDCPNVSTIALQYASILREFLQQSQLPVWNRFKNSGFWRQLTVREGRTDGKVADAEDFGGIVEVMLIVQVSTKGFDNELVTGEFEKLAQAFVAGANACSPSSPLTALVVQDHQGISNVAPADAPLRSLLTPKAVGDQISENDAMDFRIHDYISNLKFSISPTAFFQVNTLAAEKLYSLAGDWACLGPDTLLFDICCGTGTIGLTLAHRVGMVIGVEMNASAVSDAQRNAEINGIKNCRFICAKAEDVMGSLLKEHLNKPNEQVNVPSICGTDVEEISEGSTCPETENGEQESQCSENGRQEDEIAAQRGSDCENGNSLMQQFKNVVAIVDPPRAGLHPTVIKALRTNEGLRRLVYISCNPESLVANAIELCTPSPAKMEKGNKDNRGWRNMSSAGLARHRAKSMPISEAFQPIKAMAIDLFPHTEHCELVMLLER | 831 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Alju10g0284 | 831 | Gene3D | - | 71 | 110 | - | - | |
Alju10g0284 | 831 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 78 | 104 | IPR000571 | GO:0046872 | |
Alju10g0284 | 831 | SUPERFAMILY | RNA-binding domain, RBD | 168 | 237 | IPR035979 | GO:0003676 | |
Alju10g0284 | 831 | MobiDBLite | consensus disorder prediction | 53 | 67 | - | - | |
Alju10g0284 | 831 | SMART | c3hfinal6 | 76 | 104 | IPR000571 | GO:0046872 | |
Alju10g0284 | 831 | PANTHER | TRNA (URACIL-5-)-METHYLTRANSFERASE | 94 | 831 | IPR045850 | - | |
Alju10g0284 | 831 | ProSiteProfiles | SAM-dependent methyltransferase RNA m(5)U-type domain profile. | 291 | 831 | IPR010280 | GO:0006396|GO:0008173 | |
Alju10g0284 | 831 | MobiDBLite | consensus disorder prediction | 674 | 705 | - | - | |
Alju10g0284 | 831 | MobiDBLite | consensus disorder prediction | 1 | 73 | - | - | |
Alju10g0284 | 831 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 293 | 831 | IPR029063 | - | |
Alju10g0284 | 831 | ProSitePatterns | RNA methyltransferase trmA family signature 1. | 726 | 758 | IPR030390 | - | |
Alju10g0284 | 831 | Gene3D | Vaccinia Virus protein VP39 | 528 | 830 | IPR029063 | - | |
Alju10g0284 | 831 | MobiDBLite | consensus disorder prediction | 674 | 690 | - | - | |
Alju10g0284 | 831 | Pfam | tRNA (Uracil-5-)-methyltransferase | 716 | 766 | IPR010280 | GO:0006396|GO:0008173 | |
Alju10g0284 | 831 | Pfam | Methyltransferase domain | 587 | 646 | IPR025714 | - | |
Alju10g0284 | 831 | ProSiteProfiles | Zinc finger C3H1-type profile. | 76 | 105 | IPR000571 | GO:0046872 | |
Alju10g0284 | 831 | CDD | AdoMet_MTases | 589 | 643 | - | - | |
Alju10g0284 | 831 | MobiDBLite | consensus disorder prediction | 1 | 50 | - | - | |
Alju10g0284 | 831 | Coils | Coil | 301 | 321 | - | - | |
Alju10g0284 | 831 | Gene3D | - | 165 | 252 | IPR012677 | - | |
Alju10g0284 | 831 | SUPERFAMILY | CCCH zinc finger | 75 | 109 | IPR036855 | GO:0046872 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C3H | Alju10g0284 | tRNA_U5-meth_tr | 3.3e-07 | CL0063 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Alju10g0284 | 10 | 2205652 | 2210814 | Alju10g0284 | 10 | 2205652 | 2210814 | ECH |