Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0281 ATGTTCAAAAAGAGTTTCTCTATTGCAATAACGATGGGCTGCTGTGGCTGCTTTGGGTTCATAAGAAAATTCAAACGTTGCAGAAATCAGTCTGGCATCAAGACTAGTATCTCTCAGGAGCCATTGTTGGATGAAACTGAAGACAGAGAAGAAGAAGAAGATGATGATAGATCCTATAATGGGGATATTACTGACACCATTAGTGGAGATGATAGTGAAGTTCCCATTCGTGCCAAACGTTCTGAGGAAATTTTAATGTTGAGAGAGGAGAAAGATATGATTTGTAGGCAGTTTCCTGTTAAGGAAACTCACAAAGTTGTTCGAACTGAGGATGAAAATGGTAACAAGATGGTAAATGAATATGTTCGGGAATACAAGATTGGTTCTGGTAGTTATGGGAAAGTGGTTTTATACCGAAGTTGTGTAGATGGAAAGTATTATGCAATCAAGGCCTTTCACAAGTCTCATCTACAGAAGCTTCGAGTTGCACCCTCAGAGACTGCCATGACTGATGTTCTGCGGGAGGTACTCATCATGAAAATGCTGGAACATCCTAACATAGTCAATCTCATTGAGGTGATTGATGACCCAGAATCAGATCACTTCTACATGGTACTTGAATATGTAGAAGGCAAATGGGTTTGTGAGGGTTCAGGTCCTTCTTGTAGCTTGGGTGAGGAGACTGCTAGGAAATACTTGCGTGACATAGTTTCAGGATTAAGATATCTTCATGCTCATAATATAGTGCATGGGGATATTAAACCTGATAATTTGTTGGTTACACGTCACGGTACAGTAAAGATTGGGGATTTCAGTGTCAGCCAGGCCTTTGAGGATGATAATGATGTCCTTCGCCGGTCTCCTGGGACTCCTGTTTTCACTGCCCCAGAATGTTGTTTAGGTCTTACCTATAATGGTAAAGCTGCAGACACATGGGCAGTTGGAGTTACTTTGTACTGCATGATTTTGGGTGAATACCCATTTCTTGGAGACACACTTCAAGACACGTATGACAAAATAGTCAATAATCCATTAGTGCTCCCGGGTGATTTGAATCCCCAAATAAGGAGTTTACTGGAAGGATTACTTTGTAAAGATCCGAAACATCGGATGACATTGGCTGATGTGGCGCAGCATAGCTGGGTTATTGGAGATGATGGGCCAATTCCTGAATATTTGTGTTGGTGCAAACGCAAGAGATTAGGAGGAGAAGATTTAAACAGCAACAACCTACTTGCTTGA 1242 0.4138 MFKKSFSIAITMGCCGCFGFIRKFKRCRNQSGIKTSISQEPLLDETEDREEEEDDDRSYNGDITDTISGDDSEVPIRAKRSEEILMLREEKDMICRQFPVKETHKVVRTEDENGNKMVNEYVREYKIGSGSYGKVVLYRSCVDGKYYAIKAFHKSHLQKLRVAPSETAMTDVLREVLIMKMLEHPNIVNLIEVIDDPESDHFYMVLEYVEGKWVCEGSGPSCSLGEETARKYLRDIVSGLRYLHAHNIVHGDIKPDNLLVTRHGTVKIGDFSVSQAFEDDNDVLRRSPGTPVFTAPECCLGLTYNGKAADTWAVGVTLYCMILGEYPFLGDTLQDTYDKIVNNPLVLPGDLNPQIRSLLEGLLCKDPKHRMTLADVAQHSWVIGDDGPIPEYLCWCKRKRLGGEDLNSNNLLA 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0281 413 ProSiteProfiles Protein kinase domain profile. 121 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g0281 413 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 66 384 - -
Alju10g0281 413 FunFam Serine/threonine-protein kinase Ssp1 115 217 - -
Alju10g0281 413 MobiDBLite consensus disorder prediction 38 66 - -
Alju10g0281 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 248 260 IPR008271 GO:0004672|GO:0006468
Alju10g0281 413 CDD STKc_LKB1_CaMKK 127 382 - -
Alju10g0281 413 SUPERFAMILY Protein kinase-like (PK-like) 112 394 IPR011009 -
Alju10g0281 413 Pfam Protein kinase domain 121 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g0281 413 ProSitePatterns Protein kinases ATP-binding region signature. 127 150 IPR017441 GO:0005524
Alju10g0281 413 FunFam Serine/threonine-protein kinase GRIK2 111 410 - -
Alju10g0281 413 Gene3D Transferase(Phosphotransferase) domain 1 219 388 - -
Alju10g0281 413 MobiDBLite consensus disorder prediction 44 59 - -
Alju10g0281 413 Gene3D Phosphorylase Kinase; domain 1 115 217 - -
Alju10g0281 413 SMART serkin_6 121 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0281 Alju-ChrAlju10 2178441 2182894 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0281 127 388 CBL-interacting serine-threonine protein kinases AT5G10930 32.453 1.16e-42 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Alju10g0281 Pkinase 3.4e-58 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju10g0281 10 2178441 2182894 Alju10g0281 10 2178441 2182894 ECH