Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0278 ATGAGAACGACACAAATACTCTTTCTTTTCTTTTGGCTCCTAGGCGTTCTAGCCTACACGTCCTTTTGTGCCAATGTCACGTACGACCACCGTGCATTGGTCATCGACGGCAAGCGCCGTCTCCTCATCTCTGGTTCAATTCATTATCCTCGCAGTACTCCCGAGATGTGGCCGGATCTTATTCAGAAATCCAAAGATGGAGGACTCAATGTGATTGAAACCTACGTCTTCTGGAACAAGCACGAACCTGTGCAAGGCCAGTTCCGTACTGATAATGAACCATTCAAGGTAATTCATTTTTCTCTCTTCTCATCCCTCTGTTTGATTAAAATTGGTGTTCACCGCCACCACCACATACTCTGCTTTCAGAGAGAAATGCAGCGATTTACTGCTACAATCGTGGACTTGATGAAGAAAGAGAATCTCTATGCGTCTCAGGGTGGACCAATTATTTTATCTCAGATTGAAAATGAGTATGGTAACGTTGAAAATGAGTATGGTAACGCTGCTATACCTTACGTCAAGTGGACAGCTGCGATGGCCATATCACTCAATATGGGAGTTCCCTGGGTCATGTGCCAGCAAGCAGATGCTCCTGATCCCATTATTAACACTTGCAATGGATTTTACTGTGATCAATTCACATCAAACTCTAACCAGAAACCAACATTTTGGACTGAGAGTTATAGTGGCTGGTTTGGATCATTTGGTGGTGCGGTGCCCTACAGACCTGTAGAAGATCTTGCATTTGCCGTGGGGCGGTTTTTCCAACGAGGTGGAACATTACAAAATTATTATATGTACCATGGTGGGACCAACTTTGGCCGAACCTCTGGCGGACCATTCATTTCTACAAGTTATGATTATGATGCACCAATCGATGAGTATGGAATTGTTAGACAGCCTAAGTGGGGACACCTCAAAGATGTGCATAAGGCCTTAATGCTTTGTGAAGAGGCATTGCTAGCCACTGATCCCCAAATTAAATCACTTGGTCCGAATCTAGAGGCTGCAGTTTACCAGGCAGGATCTACATGTGCTGCCTTTCTTGCCAACGTGGGCGCCTCATCTGACGCAACAGTAAATTTCAATGGCAATTCCTATCACTTGCCGGCATGGTCTGTGAGCATCTTACCAGACTGCGAGAATGTAGTGCTCAATACTGCAAAGGTTAATTCTCAATCTACCATTTCAAGCTTCACAAGAGAAATTTCCAAAGAAGACGGTAATTCTTTAGAGGATTCTAGCTCTGGATGGAGTTGGACAAGTGAACCGGTAGGTATTTCAAAAGCTGATGCATTCTCAAAAGTTGGATTACTGGAGCAAATAAATACAACAGCAGACAGAAGTGACTACTTATGCATTGATCTTGATGATGGTGGTGGTCCTCAAGCTGCCCTTCACATCGAATCACTTGGCCATGTCGTTCATGCTTTTATCAATGGGAAGCTTGCAGGGAGTGGAGTTCGTGATGCTGCCAAAAAGTTGGACGTTCCTGTCACTCTTGTGGCTGGGAAGAACACAATTGATCTCCTGAGTCTAACTGGGGACTTCAGGTTGAGCCTTCCTGATTATACTTCTCTTCTAAGAGAACTTCTTTTCTTTTTTTTGCCTGAGAATGCACTTTTTTGCCACGATTCGTGGATACAGGTTGGTCTTCAAGGTGAAGAATTAGGTATTTCTAATGGATCTGGAAAATGGAACTCGGAGTCTACCCTACCTAAGAATCAACCATTGGTTTGGTACAAGACAGACTTTGCTGCTCCTTCTGGCAATAACCCAGTAGCAATTGACTTCACGGGTATGGGTAAAGGGGAGGCTTGGGTAAACGGACAAAGCATCGGTCGATTCTGGCCCACATATATTGCTCCAAAGAGTGGTTGCAATGAGGCATGCGATTACAGAGGTTCTTATAATTCCAACAAATGTCTCAAAAATTGTGGAAAGCCATCACAATCCATATACCATGTACCTCGCTCTTCGTTGCGTCCAATTGGTTACATACTTGTGTTGTTTGAGGAAAATGGAGGTGATCCAACTCAAATAAATTTTGCTACAAGACAGATAGAAAGCCTGTGTGCACACGTATCAGATTCTCACCCACCACCTGTAGACTCATGGAATACAGACGCAGAATCAGGAAGAAAACAAGGGCCTGCCTGCGTTGGATCAAGAAGTTGCAATATTGGAGTGTCAATTGATACATTTGGTGATCCATGCAGAGGAATGGCAAAGAGTTTGGCAGTTGAAGCTGCTTGTACATAA 2265 0.4397 MRTTQILFLFFWLLGVLAYTSFCANVTYDHRALVIDGKRRLLISGSIHYPRSTPEMWPDLIQKSKDGGLNVIETYVFWNKHEPVQGQFRTDNEPFKVIHFSLFSSLCLIKIGVHRHHHILCFQREMQRFTATIVDLMKKENLYASQGGPIILSQIENEYGNVENEYGNAAIPYVKWTAAMAISLNMGVPWVMCQQADAPDPIINTCNGFYCDQFTSNSNQKPTFWTESYSGWFGSFGGAVPYRPVEDLAFAVGRFFQRGGTLQNYYMYHGGTNFGRTSGGPFISTSYDYDAPIDEYGIVRQPKWGHLKDVHKALMLCEEALLATDPQIKSLGPNLEAAVYQAGSTCAAFLANVGASSDATVNFNGNSYHLPAWSVSILPDCENVVLNTAKVNSQSTISSFTREISKEDGNSLEDSSSGWSWTSEPVGISKADAFSKVGLLEQINTTADRSDYLCIDLDDGGGPQAALHIESLGHVVHAFINGKLAGSGVRDAAKKLDVPVTLVAGKNTIDLLSLTGDFRLSLPDYTSLLRELLFFFLPENALFCHDSWIQVGLQGEELGISNGSGKWNSESTLPKNQPLVWYKTDFAAPSGNNPVAIDFTGMGKGEAWVNGQSIGRFWPTYIAPKSGCNEACDYRGSYNSNKCLKNCGKPSQSIYHVPRSSLRPIGYILVLFEENGGDPTQINFATRQIESLCAHVSDSHPPPVDSWNTDAESGRKQGPACVGSRSCNIGVSIDTFGDPCRGMAKSLAVEAACT 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0278 754 FunFam Beta-galactosidase 266 393 - -
Alju10g0278 754 Gene3D - 543 628 - -
Alju10g0278 754 PRINTS Glycosyl hydrolase family 35 signature 261 276 IPR001944 GO:0004553|GO:0005975
Alju10g0278 754 PRINTS Glycosyl hydrolase family 35 signature 281 297 IPR001944 GO:0004553|GO:0005975
Alju10g0278 754 PRINTS Glycosyl hydrolase family 35 signature 57 75 IPR001944 GO:0004553|GO:0005975
Alju10g0278 754 PRINTS Glycosyl hydrolase family 35 signature 604 620 IPR001944 GO:0004553|GO:0005975
Alju10g0278 754 PRINTS Glycosyl hydrolase family 35 signature 577 591 IPR001944 GO:0004553|GO:0005975
Alju10g0278 754 PRINTS Glycosyl hydrolase family 35 signature 36 53 IPR001944 GO:0004553|GO:0005975
Alju10g0278 754 SUPERFAMILY Galactose-binding domain-like 550 709 IPR008979 -
Alju10g0278 754 FunFam Beta-galactosidase 108 317 - -
Alju10g0278 754 Pfam Glycosyl hydrolases family 35 122 313 IPR031330 -
Alju10g0278 754 Pfam Glycosyl hydrolases family 35 33 90 IPR031330 -
Alju10g0278 754 Gene3D Glycosidases 19 102 - -
Alju10g0278 754 SUPERFAMILY Galactose-binding domain-like 375 512 IPR008979 -
Alju10g0278 754 FunFam Beta-galactosidase 554 693 - -
Alju10g0278 754 SUPERFAMILY (Trans)glycosidases 26 318 IPR017853 -
Alju10g0278 754 Pfam Beta-sandwich domain in beta galactosidase 321 391 IPR041392 -
Alju10g0278 754 Gene3D - 680 754 IPR043159 -
Alju10g0278 754 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 147 159 IPR019801 GO:0004553|GO:0005975
Alju10g0278 754 Gene3D Glycosidases 114 317 - -
Alju10g0278 754 MobiDBLite consensus disorder prediction 697 721 - -
Alju10g0278 754 PANTHER BETA-GALACTOSIDASE RELATED 19 714 IPR001944 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0278 Alju-ChrAlju10 2160253 2166560 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0278 23 654 Glycoside Hydrolase AT2G28470 61.493 0.0 824