Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0267 ATGTCTGAACAAGGCCTCTCTCTTCCTTCCACCGTCAAAACCTTCCTTCCTAACCCTACTCCTCCCAAGAAGAAGAGAAATCTCCCCGGAACACCAGATCCAGATGCCCAAGTGATAGCGCTCTCGCCCAAGTCCTTGATGGCCACGAACCGTTTCGTGTGCGAAATCTGCAACAAGGGGTTTCAAAGAGACCAGAATCTGCAGCTGCACCGCCGTGGGCACAACCTTCCCTGGAAGCTCCGGCAGAGGAGCGGCGGCAAAGAAGCGGCAGCAAAGAAAGTGTACGTGTGCCCTGAAAAGACTTGCGTCCACCATGATCCTTCCAGAGCCCTCGGTGACCTCACCGGCATCAAGAAGCACTTCTTCAGAAAACACGGTGACAAGAAGTGGAACTGCCCCAAGTGCTCCAAGAAATACGCCGTTCACTCTGATTGGAAGGCTCATCTCAAGATTTGTGGCACTAGAGAGTACAAATGTCACTGTGGCACTCTTTTCTCCAGGAAAGACAGCTTCGTGACTCATAAAGCCTTCTGTAATGTCTTGGCGGAAGAAAGTTCCCGAATAAGCTTCGTCCCTGAAGCATCTATAATCCCTCAGATTTTTACTGGCTATTATCCTCCAGGGCCTGATTTGACGCAAACCATGAACATGCTTGCAACTTCGTCATCTTCTTCCTCGTGGCTGAAACCACCATACCCAGAAGCATCATTCGAGACGATTAAGTGA 726 0.5041 MSEQGLSLPSTVKTFLPNPTPPKKKRNLPGTPDPDAQVIALSPKSLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSGGKEAAAKKVYVCPEKTCVHHDPSRALGDLTGIKKHFFRKHGDKKWNCPKCSKKYAVHSDWKAHLKICGTREYKCHCGTLFSRKDSFVTHKAFCNVLAEESSRISFVPEASIIPQIFTGYYPPGPDLTQTMNMLATSSSSSSWLKPPYPEASFETIK 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0267 241 ProSiteProfiles Zinc finger C2H2 type domain profile. 52 74 IPR013087 -
Alju10g0267 241 Gene3D Classic Zinc Finger 48 75 - -
Alju10g0267 241 FunFam protein indeterminate-domain 12-like 31 101 - -
Alju10g0267 241 MobiDBLite consensus disorder prediction 222 241 - -
Alju10g0267 241 Pfam Zinc-finger double-stranded RNA-binding 52 74 IPR022755 -
Alju10g0267 241 SMART c2h2final6 95 125 IPR013087 -
Alju10g0267 241 SMART c2h2final6 52 74 IPR013087 -
Alju10g0267 241 SMART c2h2final6 130 150 IPR013087 -
Alju10g0267 241 MobiDBLite consensus disorder prediction 1 34 - -
Alju10g0267 241 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 19 208 IPR031140 -
Alju10g0267 241 ProSitePatterns Zinc finger C2H2 type domain signature. 54 74 IPR013087 -
Alju10g0267 241 Gene3D Classic Zinc Finger 87 178 - -
Alju10g0267 241 SUPERFAMILY beta-beta-alpha zinc fingers 51 150 IPR036236 -
Alju10g0267 241 FunFam protein indeterminate-domain 5, chloroplastic-like 108 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0267 Alju-ChrAlju10 2093481 2095060 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0267 16 202 IDZ Gene Family AT3G50700 75.401 1.76e-103 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Alju10g0267 zf-C2H2_jaz 6e-05 CL0361