Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0266 ATGGATGAGGACCAAGTAGTGCGCTTTAACAACACATTTTCACCTGGTTTTAGGTTCCATCCATCTGACGAGGAACTCATAGTTCATTACTTGAAGAAGAAGATCAACTCTCATCCACTTCCAGCACCTATTGTTGCTGAAATCGATCTTTATAAGTTTAACCCGTGGGACCTACCTAATAAGGCCTTGTTTGGAGAGGATGAGTGGTATTTCTTCAGCCCAAGAGACAGGAAATATCCAAATGGGTTAAGGCCAAACAGGGCAGCAGCTTCTGGGTATTGGAAGGCGACAGGAACCGATAAGCCAGTTCTGAGTCGGTGTGGATCAAAGCTGATAGGAGTGAAGAAAGCTTTGGTTTTTTATTCAGGTCGTCCTCCTAAAGGCACTAAGACCGATTGGATCATGAATGAATATAGATTGGTTGACAACACAACCAGAAAACCTTCTAGGTTCAAAGGTTCCATGCGATTGGATGATTGGGTACTATGTCGGGTTCGATATAAAGGCTACTCATCAAATCATAGAGGAGGTGAGATTCAAGAGACTGAGTGTGCCTCAAAATTGAACCTACCAATCATCACAGATTATCATCAAATGTTAGCTTCTGTTGTTCTTGGAGATGAACCTAATAAGCTTCCCTGTGACAACATGACCGGTATGAACTTTAGAAGCAGCAAAGGCAACAGTTTCAGTTCAGTGAGTCCTCAGATGACAACAATTCCCTCGTTGGACAACTTCAGTTGCTTCGATTCGCTGAAAAGAATGTCTAATGAGGATAGTCAACGTGGATTAAATCTCCTTTCTTTTAACAGTGGCAAGCCAAACCCTGAGAATTACAAGATTGATAATGTTACAGATACAAACTGCTATAGGTCTAATGAGGGATCTCTTGGACAGAGAATAGTAGATTCCGGCATCCATTTTCAAGAACTGAATGAGCTACCCTTTACAGGAAGGTTCATGCTATGGAGAAATGATTAG 981 0.4179 MDEDQVVRFNNTFSPGFRFHPSDEELIVHYLKKKINSHPLPAPIVAEIDLYKFNPWDLPNKALFGEDEWYFFSPRDRKYPNGLRPNRAAASGYWKATGTDKPVLSRCGSKLIGVKKALVFYSGRPPKGTKTDWIMNEYRLVDNTTRKPSRFKGSMRLDDWVLCRVRYKGYSSNHRGGEIQETECASKLNLPIITDYHQMLASVVLGDEPNKLPCDNMTGMNFRSSKGNSFSSVSPQMTTIPSLDNFSCFDSLKRMSNEDSQRGLNLLSFNSGKPNPENYKIDNVTDTNCYRSNEGSLGQRIVDSGIHFQELNELPFTGRFMLWRND 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0266 326 Pfam No apical meristem (NAM) protein 15 140 IPR003441 GO:0003677|GO:0006355
Alju10g0266 326 SUPERFAMILY NAC domain 10 168 IPR036093 GO:0003677|GO:0006355
Alju10g0266 326 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 235 - -
Alju10g0266 326 ProSiteProfiles NAC domain profile. 13 168 IPR003441 GO:0003677|GO:0006355
Alju10g0266 326 Gene3D NAC domain 22 171 IPR036093 GO:0003677|GO:0006355
Alju10g0266 326 FunFam NAC domain-containing protein 72-like 22 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0266 Alju-ChrAlju10 2082773 2084301 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0266 15 173 NAC Transcription Factor Family AT1G61110 71.084 6.93e-80 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju10g0266 NAM 1.7e-37 No_clan