Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0252 ATGGAATCCAGTGAGCCAATCCCAAACACTCCAAGTCCCACTTGTTCTTTCCCTCTCTCAAACTCTTCTCCTTCTTCCTCATGTTCGCCTCCTCCACAAGTGGTGGTAAGCCCTTGTGCTGCTTGTAAGATTTTAAGGCGGCGATGTGCTGAGAAATGCGTTCTCGCTCCCTATTTCCCTCCTTCTGAACCTGCCAAGTTCACCATTGCTCACAGAGTCTTCGGTGCCAGCAACATCATCAAGTTCTTGCAGGAACTTCCAGAGTCACAGAGAGCTGATGCAGTGAGCAGCATGGTGTATGAGGCAGGTGCAAGAATAAGAGACCCAGTGTATGGTTGTGCTGGTGCGATTTGTCAGCTTCAGAAGCAAGTGAGCGAGCTTCAAGCTCAGCTGGCTAAGGCTCAAGCCGAGCTTGTGAACATGCAGCTGCAGCAAGCCAACCTGGTGGCTCTTCTCTGCATGGAAATGGCTCAAACTACTCAGACTCAGACTCAGACTCAAACGTCTCCTACAAGTAATCCTCCTCCTCAGGAATATTATTCTTCACCACCATCATTATCTTCATCGTTCGAAGACACAAACTTCATTACTTCAAGCAACCTCAACTTCTTCGCCGAAAGCACTGGCCTTAACTCTTTGTGGGAGCAGCCACTTTGGACGTGA 663 0.4902 MESSEPIPNTPSPTCSFPLSNSSPSSSCSPPPQVVVSPCAACKILRRRCAEKCVLAPYFPPSEPAKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEAGARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAELVNMQLQQANLVALLCMEMAQTTQTQTQTQTSPTSNPPPQEYYSSPPSLSSSFEDTNFITSSNLNFFAESTGLNSLWEQPLWT 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0252 220 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 37 174 - -
Alju10g0252 220 MobiDBLite consensus disorder prediction 162 186 - -
Alju10g0252 220 Coils Coil 117 144 - -
Alju10g0252 220 ProSiteProfiles LOB domain profile. 37 138 IPR004883 -
Alju10g0252 220 Pfam Lateral organ boundaries (LOB) domain 38 135 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0252 Alju-ChrAlju10 1986427 1987478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0252 33 220 AS2 family AT1G07900 62.632 5.24e-77 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Alju10g0252 LOB 2.8e-41 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0163 02 1354915 1360012 Alju10g0252 10 1986427 1987478 CCT
Alju10g0252 10 1986427 1987478 Alju10g0252 10 1986427 1987478 ECH