Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0248 ATGGATCCTTCTAGTGCACAACACCAGCAAATGCCTAGCCAGTCGTCACTGGAGAATATGTTGGCTTCTTCAAAGGCACAGAATAATAATCAGGAGAGAAAGCCAAGACCTCAGCCTGAACAAGCCCTGAAATGTCCAAGATGCGACTCTACAAACACCAAATTCTGTTACTACAACAACTACAGTCTCTCCCAGCCAAGATATTTCTGCAAATCTTGCAGGAGATATTGGACCAAAGGAGGAACCCTGAGAAATGTTCCAGTGGGTGGAGGCTGCAGGAAAAACAAAAGGTCCTCATCATCTTCCTCTTCATCAAAACGGGCTCAGGATCAATCACTCACACCCAATTCCAATCCACTAATCACAACCCTACCTCCATTATCATATGGCCCCAATGACCTTACTCTTGCACTAGCTAGACTTCAGAAGCAATCTTGTGGACAATTTGGCTTTGACAACCATGATTTTTCTGTTCTGGGAAATTCTCTTGGAAATATCTCTTCCACAAACACTGGATTTCTAGATGCACTTCGTAGTGGATTCCTTGAAGCACATAGTAGTAGTAATCTTCAGAATCTGTACTATGGATATGGAAATGGGGACTTGGGAGAGGTGGACAATGGAAGTAACAGCAATAATGCTTGCGGGATTACTGGGGTCAGTGGAGAGATTATGCTTCCATTTGAACAAGAAGCGAGTAATGCCACTACTCATCAAGCAGTCACTGTCACTACCGTGAAGCAAGAAATCTGCAATAATGGCAGAGAACAAGGTGATAATACTAATAAGGTTTTGTGGGGTCTTCCGTGGCAGCTTAATAATGGAGATACAAACATGGGTGAAATTGATTCAGGAAGAGCAAATTGGAACAGTCTCACGTCGTCATCTTGGCACGGGCTTCTTAATAGTCCCCTAATGTAA 921 0.4332 MDPSSAQHQQMPSQSSLENMLASSKAQNNNQERKPRPQPEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSSSSSSSKRAQDQSLTPNSNPLITTLPPLSYGPNDLTLALARLQKQSCGQFGFDNHDFSVLGNSLGNISSTNTGFLDALRSGFLEAHSSSNLQNLYYGYGNGDLGEVDNGSNSNNACGITGVSGEIMLPFEQEASNATTHQAVTVTTVKQEICNNGREQGDNTNKVLWGLPWQLNNGDTNMGEIDSGRANWNSLTSSSWHGLLNSPLM 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0248 306 ProSitePatterns Zinc finger Dof-type signature. 45 81 IPR003851 GO:0003677|GO:0006355
Alju10g0248 306 MobiDBLite consensus disorder prediction 1 36 - -
Alju10g0248 306 Pfam Dof domain, zinc finger 41 97 IPR003851 GO:0003677|GO:0006355
Alju10g0248 306 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 19 209 IPR045174 GO:0003700|GO:0006355
Alju10g0248 306 MobiDBLite consensus disorder prediction 1 45 - -
Alju10g0248 306 MobiDBLite consensus disorder prediction 94 125 - -
Alju10g0248 306 Coils Coil 14 34 - -
Alju10g0248 306 ProSiteProfiles Zinc finger Dof-type profile. 43 97 IPR003851 GO:0003677|GO:0006355
Alju10g0248 306 MobiDBLite consensus disorder prediction 87 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0248 Alju-ChrAlju10 1944179 1945698 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0248 41 306 C2C2-Dof Transcription Factor Family AT2G28510 44.286 1.48e-55 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Alju10g0248 zf-Dof 6.3e-34 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0158 02 1335473 1336940 Alju10g0248 10 1944179 1945698 CCT