Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Alju10g0240 | ATGTACATGTTAGATCTTAATCTTAATGCGGATTCGACCGATTTGATTCAGAACCATGACTCGGCCATGTTCTCTGACAAATTTCCTGAAGCTTCGTCGAATCAAATGGCGGAATCGGGGACTTCTAATTCATCTGTCGTCAATGCTGACGGGTCCAGTACTGGAGGGGGCGATGATGAATCTTGCTCTACACGCGCTGGCGACGTAGTCACCTTCAATTTCGATATCCTTAAGGTGGACGGTGGTAACGACGTCGCAACCAGGGAGTTGTTTCCGGTGCGTGGAGCAAAAGGAGTGGATAGCGACTCTGGGAATTGGCAAGGGCAGTCTTCATCACCCTTTCCATCAAATAAGAGCTGGATGGATCTCTCATTCAATAGTCAAGGTGTCAGCACAGAGGCAAAGATGATTCGACTTCAGCAACAACCTCAGCCGCAGGTGAAGAAGAGCAGGAGAGGTCCAAGGTCTCGGAGCTCCCAGTACCGAGGAGTGACCTTCTATAGGAGGACTGGAAGATGGGAATCACATATCTGGGACTGTGGGAAACAAGTCTATTTAGGCGGTTTTGACACTGCACATGCGGCTGCTAGAGCCTACGATCGAGCTGCTATTAAATTCAGGGGAGTTGAAGCTGATATCAATTTCAATCTCAGTGATTATGAGGAGGATCTTAAACAGATGAAGAACCTCTCGAAGGAGGAGTTTGTTCATATTCTTCGTCGCCAGAGTACTGGTTTCTCTAGGGGTAGCTCAAAGTACCGGGGGGTAACGCTGCACAAATGTGGACGCTGGGAAGCTCGGATGGGACAATTTCTTGGCAAAAAGTATATATACCTTGGGTTGTTCGACAGCGAAGTAGAAGCTGCAAGGGCTTACGATAAAGCAGCCATTAAGTGCAATGGAAGGGAGGCAGTAACTAACTTTGAGCCAAGTACTTATGAAGGGGAGTTGAACACTGAAGCGATCAATGAAGGGGTCAGTCACAGTCTTGACCTCAATTTAGGCATAGCAACCCCATGCAGAGGTTCCAATGAAGGCAGGGGCAATCTTGAGCTCCAGTCTTTTCCTTCCAACATGCATGCCAGAACAAGTTCAAGGATAGAGACCAACACTGACTCAGTAATTGGCGATCAAGCTATGAAAAAGCTTGTTGTAAATGGAGATCGCCCTTCTGTAGGGCATGGCGTATATCCAAATTTCTTTCCTAGTGAGGAAAGAGCAGAGGGAATGAACACAGGTCCTTGGCAGGGAGTCCCCAACTGGACGTGGCGAAGACATGGCCAGCTAAGTGCTAACCAAGTTCCACGGTTCCCTACTGCAGCATCATCAGGATTCTCCATTTCATCATCCACTGCCATCTTCCCCGCCAAACCTATCAACTCACTTCCCCTCACTCTCTCATTTTCTTCATCCACTTCAGCTGCTCCCATCACGTCTCCATATTATTACCGCATGAAGCACCCGCATTCACCACCTTAG | 1479 | 0.4814 | MYMLDLNLNADSTDLIQNHDSAMFSDKFPEASSNQMAESGTSNSSVVNADGSSTGGGDDESCSTRAGDVVTFNFDILKVDGGNDVATRELFPVRGAKGVDSDSGNWQGQSSSPFPSNKSWMDLSFNSQGVSTEAKMIRLQQQPQPQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFNLSDYEEDLKQMKNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAARAYDKAAIKCNGREAVTNFEPSTYEGELNTEAINEGVSHSLDLNLGIATPCRGSNEGRGNLELQSFPSNMHARTSSRIETNTDSVIGDQAMKKLVVNGDRPSVGHGVYPNFFPSEERAEGMNTGPWQGVPNWTWRRHGQLSANQVPRFPTAASSGFSISSSTAIFPAKPINSLPLTLSFSSSTSAAPITSPYYYRMKHPHSPP | 492 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Alju10g0240 | 492 | MobiDBLite | consensus disorder prediction | 29 | 60 | - | - | |
Alju10g0240 | 492 | MobiDBLite | consensus disorder prediction | 96 | 119 | - | - | |
Alju10g0240 | 492 | MobiDBLite | consensus disorder prediction | 102 | 119 | - | - | |
Alju10g0240 | 492 | Gene3D | AP2/ERF domain | 251 | 310 | IPR036955 | GO:0003700|GO:0006355 | |
Alju10g0240 | 492 | Gene3D | AP2/ERF domain | 159 | 217 | IPR036955 | GO:0003700|GO:0006355 | |
Alju10g0240 | 492 | SMART | rav1_2 | 252 | 315 | IPR001471 | GO:0003700|GO:0006355 | |
Alju10g0240 | 492 | SMART | rav1_2 | 160 | 222 | IPR001471 | GO:0003700|GO:0006355 | |
Alju10g0240 | 492 | SUPERFAMILY | DNA-binding domain | 251 | 310 | IPR016177 | GO:0003677 | |
Alju10g0240 | 492 | CDD | AP2 | 160 | 218 | IPR001471 | GO:0003700|GO:0006355 | |
Alju10g0240 | 492 | Pfam | AP2 domain | 160 | 208 | IPR001471 | GO:0003700|GO:0006355 | |
Alju10g0240 | 492 | Pfam | AP2 domain | 251 | 301 | IPR001471 | GO:0003700|GO:0006355 | |
Alju10g0240 | 492 | SUPERFAMILY | DNA-binding domain | 159 | 217 | IPR016177 | GO:0003677 | |
Alju10g0240 | 492 | CDD | AP2 | 251 | 311 | IPR001471 | GO:0003700|GO:0006355 | |
Alju10g0240 | 492 | PRINTS | Ethylene responsive element binding protein signature | 253 | 264 | IPR001471 | GO:0003700|GO:0006355 | |
Alju10g0240 | 492 | PRINTS | Ethylene responsive element binding protein signature | 291 | 311 | IPR001471 | GO:0003700|GO:0006355 | |
Alju10g0240 | 492 | MobiDBLite | consensus disorder prediction | 29 | 62 | - | - | |
Alju10g0240 | 492 | FunFam | AP2-like ethylene-responsive transcription factor | 251 | 311 | - | - | |
Alju10g0240 | 492 | FunFam | AP2-like ethylene-responsive transcription factor | 159 | 218 | - | - | |
Alju10g0240 | 492 | ProSiteProfiles | AP2/ERF domain profile. | 160 | 216 | IPR001471 | GO:0003700|GO:0006355 | |
Alju10g0240 | 492 | MobiDBLite | consensus disorder prediction | 138 | 161 | - | - | |
Alju10g0240 | 492 | ProSiteProfiles | AP2/ERF domain profile. | 252 | 309 | IPR001471 | GO:0003700|GO:0006355 | |
Alju10g0240 | 492 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 117 | 362 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Alju10g0240 | Alju-ChrAlju10 | 1858402 | 1862053 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Alju10g0240 | 75 | 335 | AP2-EREBP Transcription Factor Family | AT4G36920 | 65.185 | 3.83e-100 | 306 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-AP2 | Alju10g0240 | AP2 | 2.9e-09 | CL0081 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Alju02g0149 | 02 | 1260838 | 1264411 | Alju10g0240 | 10 | 1858402 | 1862053 | CCT |