Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0240 ATGTACATGTTAGATCTTAATCTTAATGCGGATTCGACCGATTTGATTCAGAACCATGACTCGGCCATGTTCTCTGACAAATTTCCTGAAGCTTCGTCGAATCAAATGGCGGAATCGGGGACTTCTAATTCATCTGTCGTCAATGCTGACGGGTCCAGTACTGGAGGGGGCGATGATGAATCTTGCTCTACACGCGCTGGCGACGTAGTCACCTTCAATTTCGATATCCTTAAGGTGGACGGTGGTAACGACGTCGCAACCAGGGAGTTGTTTCCGGTGCGTGGAGCAAAAGGAGTGGATAGCGACTCTGGGAATTGGCAAGGGCAGTCTTCATCACCCTTTCCATCAAATAAGAGCTGGATGGATCTCTCATTCAATAGTCAAGGTGTCAGCACAGAGGCAAAGATGATTCGACTTCAGCAACAACCTCAGCCGCAGGTGAAGAAGAGCAGGAGAGGTCCAAGGTCTCGGAGCTCCCAGTACCGAGGAGTGACCTTCTATAGGAGGACTGGAAGATGGGAATCACATATCTGGGACTGTGGGAAACAAGTCTATTTAGGCGGTTTTGACACTGCACATGCGGCTGCTAGAGCCTACGATCGAGCTGCTATTAAATTCAGGGGAGTTGAAGCTGATATCAATTTCAATCTCAGTGATTATGAGGAGGATCTTAAACAGATGAAGAACCTCTCGAAGGAGGAGTTTGTTCATATTCTTCGTCGCCAGAGTACTGGTTTCTCTAGGGGTAGCTCAAAGTACCGGGGGGTAACGCTGCACAAATGTGGACGCTGGGAAGCTCGGATGGGACAATTTCTTGGCAAAAAGTATATATACCTTGGGTTGTTCGACAGCGAAGTAGAAGCTGCAAGGGCTTACGATAAAGCAGCCATTAAGTGCAATGGAAGGGAGGCAGTAACTAACTTTGAGCCAAGTACTTATGAAGGGGAGTTGAACACTGAAGCGATCAATGAAGGGGTCAGTCACAGTCTTGACCTCAATTTAGGCATAGCAACCCCATGCAGAGGTTCCAATGAAGGCAGGGGCAATCTTGAGCTCCAGTCTTTTCCTTCCAACATGCATGCCAGAACAAGTTCAAGGATAGAGACCAACACTGACTCAGTAATTGGCGATCAAGCTATGAAAAAGCTTGTTGTAAATGGAGATCGCCCTTCTGTAGGGCATGGCGTATATCCAAATTTCTTTCCTAGTGAGGAAAGAGCAGAGGGAATGAACACAGGTCCTTGGCAGGGAGTCCCCAACTGGACGTGGCGAAGACATGGCCAGCTAAGTGCTAACCAAGTTCCACGGTTCCCTACTGCAGCATCATCAGGATTCTCCATTTCATCATCCACTGCCATCTTCCCCGCCAAACCTATCAACTCACTTCCCCTCACTCTCTCATTTTCTTCATCCACTTCAGCTGCTCCCATCACGTCTCCATATTATTACCGCATGAAGCACCCGCATTCACCACCTTAG 1479 0.4814 MYMLDLNLNADSTDLIQNHDSAMFSDKFPEASSNQMAESGTSNSSVVNADGSSTGGGDDESCSTRAGDVVTFNFDILKVDGGNDVATRELFPVRGAKGVDSDSGNWQGQSSSPFPSNKSWMDLSFNSQGVSTEAKMIRLQQQPQPQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFNLSDYEEDLKQMKNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAARAYDKAAIKCNGREAVTNFEPSTYEGELNTEAINEGVSHSLDLNLGIATPCRGSNEGRGNLELQSFPSNMHARTSSRIETNTDSVIGDQAMKKLVVNGDRPSVGHGVYPNFFPSEERAEGMNTGPWQGVPNWTWRRHGQLSANQVPRFPTAASSGFSISSSTAIFPAKPINSLPLTLSFSSSTSAAPITSPYYYRMKHPHSPP 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0240 492 MobiDBLite consensus disorder prediction 29 60 - -
Alju10g0240 492 MobiDBLite consensus disorder prediction 96 119 - -
Alju10g0240 492 MobiDBLite consensus disorder prediction 102 119 - -
Alju10g0240 492 Gene3D AP2/ERF domain 251 310 IPR036955 GO:0003700|GO:0006355
Alju10g0240 492 Gene3D AP2/ERF domain 159 217 IPR036955 GO:0003700|GO:0006355
Alju10g0240 492 SMART rav1_2 252 315 IPR001471 GO:0003700|GO:0006355
Alju10g0240 492 SMART rav1_2 160 222 IPR001471 GO:0003700|GO:0006355
Alju10g0240 492 SUPERFAMILY DNA-binding domain 251 310 IPR016177 GO:0003677
Alju10g0240 492 CDD AP2 160 218 IPR001471 GO:0003700|GO:0006355
Alju10g0240 492 Pfam AP2 domain 160 208 IPR001471 GO:0003700|GO:0006355
Alju10g0240 492 Pfam AP2 domain 251 301 IPR001471 GO:0003700|GO:0006355
Alju10g0240 492 SUPERFAMILY DNA-binding domain 159 217 IPR016177 GO:0003677
Alju10g0240 492 CDD AP2 251 311 IPR001471 GO:0003700|GO:0006355
Alju10g0240 492 PRINTS Ethylene responsive element binding protein signature 253 264 IPR001471 GO:0003700|GO:0006355
Alju10g0240 492 PRINTS Ethylene responsive element binding protein signature 291 311 IPR001471 GO:0003700|GO:0006355
Alju10g0240 492 MobiDBLite consensus disorder prediction 29 62 - -
Alju10g0240 492 FunFam AP2-like ethylene-responsive transcription factor 251 311 - -
Alju10g0240 492 FunFam AP2-like ethylene-responsive transcription factor 159 218 - -
Alju10g0240 492 ProSiteProfiles AP2/ERF domain profile. 160 216 IPR001471 GO:0003700|GO:0006355
Alju10g0240 492 MobiDBLite consensus disorder prediction 138 161 - -
Alju10g0240 492 ProSiteProfiles AP2/ERF domain profile. 252 309 IPR001471 GO:0003700|GO:0006355
Alju10g0240 492 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 117 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0240 Alju-ChrAlju10 1858402 1862053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0240 75 335 AP2-EREBP Transcription Factor Family AT4G36920 65.185 3.83e-100 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Alju10g0240 AP2 2.9e-09 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0149 02 1260838 1264411 Alju10g0240 10 1858402 1862053 CCT