Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0233 ATGGGTTGCTTTCTATGCCCTCGCGAACCAACCAACAAACCTTCTTCCCTTCATTACAATTCCAAAAGCCTCATTCGCTGCGATAGGACCACGCATCATCACCATCGCGCTATTGCAGATAAGGTGAAAGCAGACTCGAACGTGAATGTGAAGAAGGAAGCTATTTCTCCCAAGTCCAATGGACTTTCTCCGGAGCTGAAGGCCTTAGATTTAGAAGGCAAAATTCCTACTGACGGAAAAGTTAATGATCTGAATCGTGCAAAATCCTTCTCCTTCGGTGAGCTTGCAGAGGCAACAGGTCATTTCAGGCCAGATTGCTTGGTGGGCGAAGGAGGCTTTGGGAAAGTTTACAGGGGATACTTGAAGAGAACCAAGCAGGTGGTGGCTATAAAGCAGCTGGACCCGGATGGACATCAAGGGAAGAGGGAATTTGTGGTGGAAGTGTTGACACTGAGTATGGCAGACCACCCTAATCTGGTCAAACTCTTAGGATTCTGTGCCATGGGACAACATAGAATGCTGGTTTATGAGTACATGCCTTTGGGATCCCTGGAGAATCATCTCTATGATCTTCCAGCAGGTAGAAAAGCACTAGATTGGAACACAAGAATGAAAATAGCAGCAGGAACAGCAAGGGGTTTGGAATATTTGCATGATAAAATGAAGCCACCAGTGATATACAGGGACCTGAAATGTTCCAACATACTGTTAGGAGAGGGATATCATCCCAAGTTGTCTGATTTTGGGTTGGCAAAAGTAGGGCCAAGTGGAGAAGACACACATGTTTCAACTAGGGTTATGGGCACATATGGCTATTGTGCTCCTGAATATGCCATGACTGGTCAATTAACTTTTAAGTCCGACATTTACAGCTTCGGTGTTGTTCTTTTGGAGCTCATCACCGGCAAACAAGCTTTTGACAATTCAAGACCTGCCAAACAACAAAACCTCGTCTCTTGGGCAAGGCCAAAGTTCAAGGACAGGAAAAGATTCTCAGAAATGGCGGATCCATCGCTTGAAGGACAATATCCAGTGAGAGGATTGTACCAAGCTCTGGCCATTGCAGCCATGTGTGTGCAAGAGAAGCCTCATATGAGACCTGTTATTGCTGACGTCGTCACTGCCCTCAACTTCCTCGCTTCCCAAAAATATGATCCACGTCATCAAATTTCACCCTCCAAGCCCAAATCCATGACAGATCATCATCACGATCATACTCTTCTTGATGTTAATCTCTCTGACTCAGACGGTTCTGGGACCCACCTTAACAATTCTGAGACAGATCGATCTGAGAATGAGGGAAATAATTCTGATGAGTCAGACAGATCTGGGAACGAAGAAGAAAATTAA 1350 0.4526 MGCFLCPREPTNKPSSLHYNSKSLIRCDRTTHHHHRAIADKVKADSNVNVKKEAISPKSNGLSPELKALDLEGKIPTDGKVNDLNRAKSFSFGELAEATGHFRPDCLVGEGGFGKVYRGYLKRTKQVVAIKQLDPDGHQGKREFVVEVLTLSMADHPNLVKLLGFCAMGQHRMLVYEYMPLGSLENHLYDLPAGRKALDWNTRMKIAAGTARGLEYLHDKMKPPVIYRDLKCSNILLGEGYHPKLSDFGLAKVGPSGEDTHVSTRVMGTYGYCAPEYAMTGQLTFKSDIYSFGVVLLELITGKQAFDNSRPAKQQNLVSWARPKFKDRKRFSEMADPSLEGQYPVRGLYQALAIAAMCVQEKPHMRPVIADVVTALNFLASQKYDPRHQISPSKPKSMTDHHHDHTLLDVNLSDSDGSGTHLNNSETDRSENEGNNSDESDRSGNEEEN 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0233 449 SUPERFAMILY Protein kinase-like (PK-like) 88 402 IPR011009 -
Alju10g0233 449 SMART serkin_6 102 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g0233 449 MobiDBLite consensus disorder prediction 411 425 - -
Alju10g0233 449 FunFam Serine/threonine-protein kinase PBS1 179 394 - -
Alju10g0233 449 ProSitePatterns Protein kinases ATP-binding region signature. 108 131 IPR017441 GO:0005524
Alju10g0233 449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672|GO:0006468
Alju10g0233 449 Pfam Protein kinase domain 107 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g0233 449 ProSiteProfiles Protein kinase domain profile. 102 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g0233 449 MobiDBLite consensus disorder prediction 426 442 - -
Alju10g0233 449 PANTHER OS07G0668900 PROTEIN 43 388 - -
Alju10g0233 449 Gene3D Phosphorylase Kinase; domain 1 75 178 - -
Alju10g0233 449 MobiDBLite consensus disorder prediction 408 449 - -
Alju10g0233 449 CDD STKc_IRAK 108 377 - -
Alju10g0233 449 Gene3D Transferase(Phosphotransferase) domain 1 179 399 - -
Alju10g0233 449 FunFam serine/threonine-protein kinase PBS1-like 74 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0233 Alju-ChrAlju10 1759452 1762783 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0233 78 381 Glycoside Hydrolase AT3G07070 61.842 6.16e-139 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Alju10g0233 Pkinase 2.8e-47 CL0016