Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0225 ATGTACCCACACTCTAACGCTCCGTTCTCACGCGCCGCCAACTCCATGGATCATTCGCCGTCGCCAACCGCAGCCACCGTTCCACTACCCTACCCTTCAGTTACGTCAATGCATTCCATCTCCACTTCTCAGCCACACTTTATTATTCCCGACCAGCTCGCCGTCACTGATTTTGACTCGCTGCTCAACTCGGAGATGAGCCTCAACAATAGTGGCAGCAGCGGTTGTAGCAGCTACGGCTCGCCCAGGTCGCTGGCGACCTATAAAACTCAACGGCCAAGCTTGATGCAGCGGAGCGTGAGCAGCCACTCGCTCCATAAGAATGAACATCGCCACCCTATTTCTGCTCTGTTTACCGAGTTTTTATACTCCGACAACGGTCCGGTACGCCGAGTTTACAGCACCGGTGATTTGCAGAGGAATAATCAAGGGTCAGAGATTGCATTGTCAAGCGAAAGTAGTATGATCATAGAAGGAATGAGCAGAGCATGTCGCTATAGTCCAGAGGAGAAGAAGGTGAGGATTGAGAGATATAGAAGCAAGCGAAATCTGAGAAACTTCAACAAGAAAATCAAGTATGCTTGCAGGAAGACATTAGCAGACAGCAGGCCACGCATCAGAGGAAGATTTGCGAGGAACGAAGAAACTGAGAAGAACCCTGAAGTTCAATGGAGCCATGAGAATGGTGTTGGAGCTGAGGAAGAAGATGAAGGAGAAGAGAATTGGTTTAATTTGTTTGATAATTTAGTTGCTGCAAATAATCATGTTCAAGAGCCTCAAGATAATAATTCTTCATTTGGTCTCATGTCTTAG 813 0.476 MYPHSNAPFSRAANSMDHSPSPTAATVPLPYPSVTSMHSISTSQPHFIIPDQLAVTDFDSLLNSEMSLNNSGSSGCSSYGSPRSLATYKTQRPSLMQRSVSSHSLHKNEHRHPISALFTEFLYSDNGPVRRVYSTGDLQRNNQGSEIALSSESSMIIEGMSRACRYSPEEKKVRIERYRSKRNLRNFNKKIKYACRKTLADSRPRIRGRFARNEETEKNPEVQWSHENGVGAEEEDEGEENWFNLFDNLVAANNHVQEPQDNNSSFGLMS 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0225 270 ProSiteProfiles CCT domain profile. 171 213 IPR010402 GO:0005515
Alju10g0225 270 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 66 229 IPR045281 GO:0009909
Alju10g0225 270 Pfam CCT motif 173 213 IPR010402 GO:0005515
Alju10g0225 270 MobiDBLite consensus disorder prediction 206 238 - -
Alju10g0225 270 MobiDBLite consensus disorder prediction 206 222 - -
Alju10g0225 270 MobiDBLite consensus disorder prediction 8 24 - -
Alju10g0225 270 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0225 Alju-ChrAlju10 1673982 1676192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0225 170 226 C2C2-CO-like Transcription Factor Family AT5G57660 52.632 7.09e-12 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Alju10g0225 CCT 2e-17 CL0281