Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0206 ATGGCTCCAGCTAAAGCCATTTTATCAGTTGATAGTTCGAAGAAAACTGATCCAAAGGCGCAGGCCTTGAAAACTGCTAAAGCAGTCAAGTCAGGCCCTACCTTCAAAAAGAAGGTCAAGAAAATCAGAACCTCTGTTACCTTCCATCGGCCAAAGACTTTGAAAAAGGCTAGGAATCCCAAATACCCTCGCATTAGTGCTCCACCAAGGAATAAACTTGATCATTATCAAATTTTGAAGTACCCTCTCACTACTGAGTCTGCAATGAAAAAGATTGAAGACAACAACACATTGGTTTTCATTGTTGATCTACGTGCTGACAAGAAGAAGATAAAGGATGCGGTGAAGAAAATGTATGACATTCAGGCCAAGAAAGTAAATACCTTGATCAGGCCCGATGGCACCAAGAAGGCATATGTTAGGCTGACACCTGATTATGACGCATTGGACGTAGCAAACAAAATTGGGATCATCTAA 477 0.413 MAPAKAILSVDSSKKTDPKAQALKTAKAVKSGPTFKKKVKKIRTSVTFHRPKTLKKARNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDLRADKKKIKDAVKKMYDIQAKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0206 158 Gene3D - 39 158 IPR012677 -
Alju10g0206 158 Pfam Ribosomal protein L23 78 140 IPR013025 GO:0003735|GO:0005840|GO:0006412
Alju10g0206 158 NCBIfam 50S ribosomal protein L23 82 158 IPR019985 GO:0003735|GO:0005840|GO:0006412
Alju10g0206 158 Pfam Ribosomal protein L23, N-terminal domain 19 68 IPR005633 -
Alju10g0206 158 ProSitePatterns Ribosomal protein L23 signature. 136 151 IPR001014 GO:0019843
Alju10g0206 158 PANTHER 60S RIBOSOMAL PROTEIN L23A 11 158 IPR013025 GO:0003735|GO:0005840|GO:0006412
Alju10g0206 158 MobiDBLite consensus disorder prediction 1 28 - -
Alju10g0206 158 FunFam 60S ribosomal protein L23a 36 158 - -
Alju10g0206 158 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 75 151 IPR012678 GO:0003735|GO:0005840|GO:0006412
Alju10g0206 158 Hamap 50S ribosomal protein L23 [rplW]. 78 158 IPR013025 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0206 Alju-ChrAlju10 1530192 1531902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0206 1 158 Cytoplasmic Ribosomal Protein Gene Family AT2G39460 86.076 5.69e-69 204