Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0205 ATGATGTCTTCCAATTCAGGCACGTCTGATAATGATTCTTTGTTTTGGGAAGGACACAAGGTATCCTCAATTATCATATTTGCTGCCATCTTCATCATAGTAACATTCTACAGCATGTGTCAGTGCTACTTGTATAGAGGCCCTCGCGCTAGTTCCTCCAGAAACCAGCCTTCAAGGAGGGATTTGAATGAGCCTGATCCTGATGATGATCATCATTCTATACAGATTCAAGGTCGTGGTTTAGAGTTGAGGGTCGTATCATCTCTTCCGACGTCTCAGTTTAAGAAGAATGAGGGAAGTAACATAGAGTGCGCGATATGCTTGGCAGAGTTTGAAGAAGAGGAATGGGTTAAGAGACTTCCTAGCTGCGCCCATGTCTTTCATGTTTATTGCATAGCCACCTGGTTTCGGTCTCGCTCCAATTGTCCTATCTGCAGATCTAATGTCAATCATCAAGATCATCTCGCTCTTAGCTTGGAATCATCTGTTTCTTACTACGCGTCGCCTGACGAGACGTTGAGCAGAGGCGAGTTTTCGCCACAAAGACCTTCACAATTAGGCCGTCACATTACAACACTACAACCCACCTCGTGTTCCAATTGA 603 0.4461 MMSSNSGTSDNDSLFWEGHKVSSIIIFAAIFIIVTFYSMCQCYLYRGPRASSSRNQPSRRDLNEPDPDDDHHSIQIQGRGLELRVVSSLPTSQFKKNEGSNIECAICLAEFEEEEWVKRLPSCAHVFHVYCIATWFRSRSNCPICRSNVNHQDHLALSLESSVSYYASPDETLSRGEFSPQRPSQLGRHITTLQPTSCSN 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0205 200 SMART FANCL_C_2 100 154 - -
Alju10g0205 200 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 67 152 IPR013083 -
Alju10g0205 200 MobiDBLite consensus disorder prediction 59 73 - -
Alju10g0205 200 SUPERFAMILY RING/U-box 94 152 - -
Alju10g0205 200 Pfam Ring finger domain 103 146 IPR001841 -
Alju10g0205 200 SMART ring_2 104 145 IPR001841 -
Alju10g0205 200 MobiDBLite consensus disorder prediction 49 73 - -
Alju10g0205 200 ProSiteProfiles Zinc finger RING-type profile. 104 146 IPR001841 -
Alju10g0205 200 PANTHER RING-H2 FINGER PROTEIN ATL16 21 158 IPR044600 GO:0016567|GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0205 Alju-ChrAlju10 1528759 1529361 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0205 61 149 C3H Transcription Factor Family AT4G33565 44.565 4.86e-21 87.4