Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0203 ATGGCGATTACTAGAATTGCTGTCGGACATCCATCGGAGTTTGGCCAAGCCGGTGCTCTTAAGGCTGCTCTGGCCGAGTTCATTTCAGTGCTCATCTTTGTGTTCGCCGGAGAAGGCTCCGGCATGGCTTTCAACAAGTTGACGGACAATGGGTCGTCGACGCCGGCGGGGTTAGTATCAGCATCGTTAGCTCATGGCTTCGCATTGTTCGTGGCGGTTTCAGTTGGCGCCAACATTTCAGGAGGCCATGTGAATCCCGCTGTTACTTTTGGCGCCTTCGTCGGGGGTCACATCTCTCTCATTAGAACCATTTTGTACTGGATCGCCCAATTGCTTGGCTCTGTTGTTGCTTGCTTACTCCTTAAATTCGCCACCGGCGGACTGGAAACATCTGCTTTTTCATTATCTACCGGAGTGGGTGCATGGAACGCGGTGGTGTTTGAGATAGTGATGACGTTTGGTCTAGTGTACACGGTGTATGCGACGGCTTTAGACCCAAAGAAGGGTGACATTGGGACAATTGCTCCGATCGCGATTGGGTTCATCGTCGGAGCGAACATATTGGCTGGTGGGGCATTTGATGGAGCATCCATGAACCCGGCTGTCTCTTTCGGGCCAGCCGTCGTGAGCTGGACGTGGGCCAATCACTGGGTTTACTGGTTGGGCCCCCTCATCGGCGCAGCTATAGCTGCTGTTGTTTATGAGATGGCATTCATGAACCAAACTCATCAACAACTTCCCGTCGCAGAATATTAA 756 0.5225 MAITRIAVGHPSEFGQAGALKAALAEFISVLIFVFAGEGSGMAFNKLTDNGSSTPAGLVSASLAHGFALFVAVSVGANISGGHVNPAVTFGAFVGGHISLIRTILYWIAQLLGSVVACLLLKFATGGLETSAFSLSTGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGDIGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWANHWVYWLGPLIGAAIAAVVYEMAFMNQTHQQLPVAEY 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0203 251 Pfam Major intrinsic protein 17 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju10g0203 251 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Alju10g0203 251 PANTHER AQUAPORIN-8 6 246 IPR034294 -
Alju10g0203 251 FunFam Probable aquaporin TIP1-1 4 251 - -
Alju10g0203 251 CDD MIP 21 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju10g0203 251 Gene3D Glycerol uptake facilitator protein. 4 250 IPR023271 -
Alju10g0203 251 NCBIfam MIP family channel protein 25 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju10g0203 251 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju10g0203 251 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju10g0203 251 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju10g0203 251 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju10g0203 251 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju10g0203 251 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju10g0203 251 SUPERFAMILY Aquaporin-like 19 244 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0203 Alju-ChrAlju10 1490590 1491552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0203 1 251 Major Intrinsic Protein MIP AT2G36830 76.494 8.17e-138 385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g2648 02 31644340 31647637 Alju10g0203 10 1490590 1491552 CCT