Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0201 ATGGTTGAGCAAGAAATGAGAAAAGGTCCATGGACGGAACAGGAGGACATAAAACTGGTGTCGTTTGTGGGCTTGTTTGGAGATCGAAGATGGGATTTTATTGCCAAGGTTTCAGGTTTGAAGGTGGCGGGAGATAGATCACAAAAAACAGGCAAAAGTTGCCGTTTACGTTGGGTTAATTACCTTCATCCTGGTCTCAAACGGGGCAAGATGACCCCCCAAGAAGAGCGTCTCGTCCTCGACCTTCACTCTAAATGGGGAAATAGGTGGTCAAGAATCGCTCGCAAATTACCAGGACGCACTGATAATGAGATTAAGAATTACTGGAGGACTCACATGAGGAAGGTGGCTCAAGAGAAAAAGCGAGCAGCCGCTGCTAATAATTTATCACCTTTATCATCATCAGCATCATTCTCCAAGAACAGTACTACTGGAGAAGAAAGCTTTTATGACACAGGAGGTCCTGGTAATAACATGATATCTTCCGCAGAAATACAGATAATAGGTCAAGATGAAGAAGAAGGGTACTCTATGGATGATATATGGAAAGATATTGAAGTGTCAGAAGAGAATAATAACAGTGAAGAGGGCTGCAACTTCTCTTGTCCTTCATGGGAGTACTCTGCTACTTCAGACTCGTTATGGGTTATGGACGAAGAGGAAAGTAAGATTTTTGACCCATTTTTTCCCTGTTACGAACAAGCAGGGACATCACTACTTCTCTAA 726 0.4298 MVEQEMRKGPWTEQEDIKLVSFVGLFGDRRWDFIAKVSGLKVAGDRSQKTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLDLHSKWGNRWSRIARKLPGRTDNEIKNYWRTHMRKVAQEKKRAAAANNLSPLSSSASFSKNSTTGEESFYDTGGPGNNMISSAEIQIIGQDEEEGYSMDDIWKDIEVSEENNNSEEGCNFSCPSWEYSATSDSLWVMDEEESKIFDPFFPCYEQAGTSLLL 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0201 241 Gene3D - 71 114 - -
Alju10g0201 241 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 3 62 IPR017930 -
Alju10g0201 241 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Alju10g0201 241 CDD SANT 10 62 IPR001005 -
Alju10g0201 241 FunFam MYB transcription factor 70 141 - -
Alju10g0201 241 SUPERFAMILY Homeodomain-like 5 109 IPR009057 -
Alju10g0201 241 SMART sant 67 115 IPR001005 -
Alju10g0201 241 SMART sant 7 64 IPR001005 -
Alju10g0201 241 MobiDBLite consensus disorder prediction 133 155 - -
Alju10g0201 241 ProSiteProfiles Myb-like domain profile. 3 62 IPR001005 -
Alju10g0201 241 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Alju10g0201 241 CDD SANT 70 113 IPR001005 -
Alju10g0201 241 Gene3D - 8 67 - -
Alju10g0201 241 Pfam Myb-like DNA-binding domain 8 62 IPR001005 -
Alju10g0201 241 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
Alju10g0201 241 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 2 128 IPR044676 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0201 Alju-ChrAlju10 1482617 1483830 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0201 1 239 MYB Transcription Factor Family AT5G59780 56.420 1.35e-81 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju10g0201 Myb_DNA-binding 4.3e-12 CL0123