Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0182 ATGGCTTCTTCTTCCTCAACACTCTCCCTCTCACTGGCCGTAGCTTCCTTCCTTTTCCTCGCCACTCTCACTGATGCCACCATCCTTACCCTTGTCAACAACTGCAAGTTCACCGTCTGGCCCGCCATCCAACCTAACGCCGGTCACCCCGTCCTCGCTCGCGGCGGCTTTGTTCTCCATTCCCTAACTCACATCTCCATTCCCCTACCGGACCGACACTGGTCGGGTCGGGTCTGGGCCAGAACAGGCTGTGGCTACTCCGGCAACCAGTTCCTCTGCGCCACCGGAGACTGTGGTGGCCGCCTGGAGTGCAACGGCGCCGGCGGCGCAACTCCGGCGTCTCTGGCTCAGTTCAGCGTCCACCATGGCGTGAACGACTACTCCTCCTACGCCGTGAGCCTTGTGGACGGCTTCAACATCCCCATGACGGTGACCCCACACGAGGGTAAAGGCGTGTGTCCGGTGGTGGGTTGTCGTGTGGATCTGCTTGCAACGTGTCCTCCGGCGTTGCAACACCGTGTACCGCAGGGTCACGGTCCGGTGATGGCGTGTAAGAGTGGGTGCGAGGCTTTTAGGACGGACGAGCTGTGCTGCAGGAACCAGTTCAATAGCCCACAAATATGTAAGCCTTCGCTCTACTCAGATTTCTTCAAGCATGCGTGTCCTGCGACCTTCACTTATGCTCATGACACCCCTTCGCTAATGCACGAGTGTTCTTCCCCAAGGGAGCTCAAGATAAGGAAGAAATTAAGGGGAAAAAGGCGGGAATATCTATATGGGTACCTGCCGCTGCCGCTGCCGCTGCAGGATAGACTGAAAATAGAGCTGAGGTGGAGGTGGAGGTGGAGGTCGGAGTGGGGAGGGGACGATGAAGAGGAGGACAGAGAACATAATAAGGAAGAGGCTTTGTTGGTGCTTGCGGAGGTGGGCGGGTCGCTGGACGGTTTTCTGGCAGATTTAGTGGCGGCAATTAAGGCAGGCAGTGTTCCGGGTTCGATTGTGAGGAGGTTCTTTGATTTGGAAAAGTCCGCTGTGTTCCGGTGGTTGCTGAATTTTGGAGGGTTTAAGGAGCGGTTGTTGGCGCATGATTTGTTCCTGGCCAAAGTTGCTATGGAGTGTTTTGTTGGGATCTTTACTAAGCAAGACGTGTTATGA 1155 0.5602 MASSSSTLSLSLAVASFLFLATLTDATILTLVNNCKFTVWPAIQPNAGHPVLARGGFVLHSLTHISIPLPDRHWSGRVWARTGCGYSGNQFLCATGDCGGRLECNGAGGATPASLAQFSVHHGVNDYSSYAVSLVDGFNIPMTVTPHEGKGVCPVVGCRVDLLATCPPALQHRVPQGHGPVMACKSGCEAFRTDELCCRNQFNSPQICKPSLYSDFFKHACPATFTYAHDTPSLMHECSSPRELKIRKKLRGKRREYLYGYLPLPLPLQDRLKIELRWRWRWRSEWGGDDEEEDREHNKEEALLVLAEVGGSLDGFLADLVAAIKAGSVPGSIVRRFFDLEKSAVFRWLLNFGGFKERLLAHDLFLAKVAMECFVGIFTKQDVL 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0182 384 Gene3D Thaumatin 27 247 IPR037176 -
Alju10g0182 384 Pfam Thaumatin family 33 242 IPR001938 -
Alju10g0182 384 PANTHER OS03G0233200 PROTEIN 17 241 IPR001938 -
Alju10g0182 384 ProSiteProfiles Thaumatin family profile. 26 246 IPR001938 -
Alju10g0182 384 SMART tha2 29 246 IPR001938 -
Alju10g0182 384 CDD TLP-PA 28 246 - -
Alju10g0182 384 FunFam Osmotin-like protein 28 248 - -
Alju10g0182 384 SUPERFAMILY Osmotin, thaumatin-like protein 28 246 IPR037176 -
Alju10g0182 384 PRINTS Pathogenesis-related protein signature 28 40 IPR001938 -
Alju10g0182 384 PRINTS Pathogenesis-related protein signature 77 88 IPR001938 -
Alju10g0182 384 PRINTS Pathogenesis-related protein signature 89 118 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0182 Alju-ChrAlju10 1343338 1346725 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0182 7 240 Receptor kinase-like Gene Family AT5G38280 35.714 9.53e-41 150