Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0177 ATGCATGGTTTCACCAATCTGCATCGAATTCTGAGATGGAAAAAGTGGCAGAAGAGGGCGAAGGGATTGGTGCATCTTTTTCACTCCTCCGTTTCACGAGCTTCTTCTTCAGCCTTGACCCGTGTATTTTTGCATGGTCTCAAGCCTAAAGCTTCAAGCTTTGCCTGGGAGTACTCCTACTCACATACACTCCAAAACCCAAGAGCCATACGTGATTACTACTACTGCTACTATAAAACAAGAGAATTGAAGGAGCTTGTGATCAGGAGGGGTAAAGTGATGATGGAGGGGAGTGAGAATAATGGATCGAGTGGTGGGAGGAATAATAATAATAATAATAATGGAGTAGGGGGATCGAGATGGAACCCAACAAAGGAGCAAGTAAGTATGTTGGAGAATCTGTATAAGCAAGGGATAAGGACGCCCAATACTGAGGAGATACAGCAAATAACAGCCAGGCTAAGGGCTTTTGGGCACATAGAAGGCAAGAATGTGTTCTATTGGTTTCAGAATCACAAAGCCAGGCAGCGTCAGAAGCAGAAGCAAGAATCCTTTGCTTACTTCAATCGCTTCCTTCATTCTCCTCCTCCTCTCTTCTCTGCCCCACCGCTCTGCCCTAATGTGATATGTAGGCCATATTATGTGCCACATAGTGAAATGGGGTATGTTGCTCATCATCAACATTCCAAAGTGCTTCTGCCAGCAGGGACAGGCATTAGGAGGATGCCCAGAAACTGTGAGGCATACACACAAATGCATCAGGACACAGTAGTAATGTCGGATGATCATATTCATGGGCACTTGAAGAACAAAGAAACGCTTCCGCTTTTCCCTCTGCAGCCAACTGGCTTTCTGGAAGACAAAACCAATTCATTTTCTGTTGATGCCACTCCAACTCATCATCACAATGACGAAGAAGATAATGACCCACAAGGAAACCAGCCCTTCTTTGATTTCCTTTCTTCTTCAGGCCAAGATTTTCTGCATAGAAAGTAA 996 0.4458 MHGFTNLHRILRWKKWQKRAKGLVHLFHSSVSRASSSALTRVFLHGLKPKASSFAWEYSYSHTLQNPRAIRDYYYCYYKTRELKELVIRRGKVMMEGSENNGSSGGRNNNNNNNGVGGSRWNPTKEQVSMLENLYKQGIRTPNTEEIQQITARLRAFGHIEGKNVFYWFQNHKARQRQKQKQESFAYFNRFLHSPPPLFSAPPLCPNVICRPYYVPHSEMGYVAHHQHSKVLLPAGTGIRRMPRNCEAYTQMHQDTVVMSDDHIHGHLKNKETLPLFPLQPTGFLEDKTNSFSVDATPTHHHNDEEDNDPQGNQPFFDFLSSSGQDFLHRK 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0177 331 Gene3D - 118 187 - -
Alju10g0177 331 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 100 319 IPR044555 GO:0003700|GO:0099402
Alju10g0177 331 SUPERFAMILY Homeodomain-like 114 187 IPR009057 -
Alju10g0177 331 Pfam Homeodomain 119 178 IPR001356 GO:0003677
Alju10g0177 331 ProSiteProfiles 'Homeobox' domain profile. 124 179 IPR001356 GO:0003677
Alju10g0177 331 CDD homeodomain 120 180 IPR001356 GO:0003677
Alju10g0177 331 MobiDBLite consensus disorder prediction 97 121 - -
Alju10g0177 331 FunFam WUSCHEL-related homeobox 4 118 185 - -
Alju10g0177 331 SMART HOX_1 116 183 IPR001356 GO:0003677
Alju10g0177 331 MobiDBLite consensus disorder prediction 288 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0177 Alju-ChrAlju10 1316312 1319537 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0177 109 321 Wox Gene Family AT5G59340 41.700 1.48e-51 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Alju10g0177 Homeodomain 4.6e-18 CL0123