Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0175 ATGGTTTTCTCTTCTATTCCAGTCTATTTAGATCCTCCCAATTGGCAGCCGCAACAAAATCATCAGCAGTCGAATGGAACTGAAAGCACTCAGCTGCTTCCTCATCCTGGAGGAGGTTGCAGTGCAGGTTCAGTCCGGCCCGGTTCAATGGCTGACCAGGCCCGGCTAGCAAAGCTACCACCGCCGGAGGCAGCCCTAAAGTGTCCCCGTTGCGAATCCACCAACACCAAATTTTGCTACTTCAACAATTACAGCCTGTCTCAACCTCGTCACTTCTGCAAGACATGTCGGCGATACTGGACAAGAGGCGGCGCTCTCAGGAACGTTCCAGTCGGAGGCGGATGCCGGAGAAACAAGAAAAGCAAAAGGAGCCGCTCAAAGTCTCCGGAAGCCGCCACACCCACCACCGCTGACAACAAGCAGACCCTTCACCCCAACGCAGCCGCCAGTGCAATCCCCCCAGGCGCCGCCTCCGCCACCGAGCTGATCGGTCAGTTGCAGCAGCCTTCCAACTTGCCATTCATGGCTTCTTTACAAAACCTGGGCGGCCGTCACGGCTTAGGGAACATGGGCCTGAGCTTGCGCGACATTTTAGCCCAGAATGAGCCCATGGGCTTTCAAATCGGCGGAGTAGATCACAACCAGTGGCGCTCACAGCAATTCCCTAATTTCTTGAGTGGGTTCGAGTCAAATAATTCAGTTGACTCTTCTTACCACCACCAGTTTCAAAGTGAGGGTATGGCACTAGTACAAAATGGAATGATCGGAGATTCAAGTTCTAGGGTTACAACTCAGCTGCCACCTGTTAAACTGGAAGAGAATAGAGCCCTAAATTTGTCAAGACCACCAATAGGTAATAATCAGTACTATTCATGGACTGATTTATCGGGTCTTGCATCTTCTTCCACTGGCCACATCTTATAA 924 0.5162 MVFSSIPVYLDPPNWQPQQNHQQSNGTESTQLLPHPGGGCSAGSVRPGSMADQARLAKLPPPEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKKSKRSRSKSPEAATPTTADNKQTLHPNAAASAIPPGAASATELIGQLQQPSNLPFMASLQNLGGRHGLGNMGLSLRDILAQNEPMGFQIGGVDHNQWRSQQFPNFLSGFESNNSVDSSYHHQFQSEGMALVQNGMIGDSSSRVTTQLPPVKLEENRALNLSRPPIGNNQYYSWTDLSGLASSSTGHIL 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0175 307 ProSitePatterns Zinc finger Dof-type signature. 68 104 IPR003851 GO:0003677|GO:0006355
Alju10g0175 307 MobiDBLite consensus disorder prediction 12 34 - -
Alju10g0175 307 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 36 233 IPR045174 GO:0003700|GO:0006355
Alju10g0175 307 MobiDBLite consensus disorder prediction 111 141 - -
Alju10g0175 307 ProSiteProfiles Zinc finger Dof-type profile. 66 120 IPR003851 GO:0003677|GO:0006355
Alju10g0175 307 Pfam Dof domain, zinc finger 65 120 IPR003851 GO:0003677|GO:0006355
Alju10g0175 307 MobiDBLite consensus disorder prediction 12 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0175 Alju-ChrAlju10 1294154 1295295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0175 1 122 C2C2-Dof Transcription Factor Family AT2G37590 54.140 1.03e-47 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Alju10g0175 zf-Dof 1.1e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0113 02 950634 951684 Alju10g0175 10 1294154 1295295 CCT