Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0169 ATGGTTGGGCTGCGTCGTTTAGTTTGGGAACGCAACACCGGCACACGGACACGCGTTGGAGTCAGCGCTAAAGTCAAGCTAGTTTTCCAGTTTGGAAGGAAAGCCATCAAAGAAGCATCTTCCCACAATGCTCTCTCTTCCCTTCCTCACCTCACTCCTCTCATGGAGCTCTTGAACCCTTCTCATCCTCCTCACCATCAGCTGTCTGTGGTTACCGGAGGCCCCTTCCATGGCTCTTCGCCGCCCCTCACTCTGACTTCGCCCTTCGCCTTCCACGGAGCCGCCACCTCTCAGCCACCACATCCCATGGCAGAATGTACTGAATCCGTCTACGTTGCTGTCGGAAAGTCGGTGGACAAAACTGCCCATTTGCTTCAATGGACTTTTGGCCGCTTCAGCAACTCAGAAATTTGCATTCTCCATGTTCATCAACCTTCCTCTATGATCCCCACTCTTTTGGGAAAATTGCCTGCAACCCAAGCAAATCCTGAAGTCGTTTCTGCTTTTAGAAGAGAGGAAAGAGAACATACCATGAGGCTTTTGGAAAATTACATGAGCATTTGCCGTGCAGCTAAGGTCAAGGCAACCAGTGTGATAGGTGAAGCTGAGCAAGTGCACAAAGGAATTGTTGATTTAATTATCAAGCATGGTGTTAGGAAGCTTGTTATAGGAGCGGTGCCCGAGAATCGCATGAAGGTGAAAAGGAATTCCAAGAAAGCAAATTATGCTGCCAAGAATGCTCCCCCATTCTGTGAGATATGGTTTATCCACAAAGGTAAACTCTTATGGACAAGGGAAGCTTCTGAAAATCCTTGTTCCTTGTCTTCACAATCTCAACCTGAGGTTGCTGCCTCGGGCAGATTGATAACTGGATCATTACAATATAACGAGAGTGAATTATTCCATAGATCAAATTCTGCAAGAACTGCAATCTGTACTGGAACTGGTAGTTGGTCTCAGGGTGAAATCTTAGAAACAGATGCAACTTCATCATCCAAATCATCTACTTGTACCAGTCAGTGTTCTCCCCAAAATTCTACTGGGTGTTATTTAGGGACTTCTTCTGATGTTGAGGAAGATAGACTTCTTACTCTACTTGCTGAAGCCAAAATAGAAGTTGAGGCAGCAAAAGACAAGGGTTTAGTGGAGCTTTTGAAATGCAAAAGACTTGAAGCAGAAGCTATAGAGGCCATAAATAAGGTCAATATACTTGAATCGGCTTATACATATGAAGTAAAGCTAAGAAAGGAGGCAGAGAGTGCACTGCAAGCCACAGTAGAGGAGCAACAAAAGCTCTTGGATGAGAGTGAAGAACTTGCTACTGTGCTACAGAGGACCATGAGAAATATTGCCCTTCTGGATAGTCGTGCACAGGAAGCAAACCGCAGGCATGATGAAGCTGCGGATGAGTTATTATTAATTCAAGCATCCATCTCAACACTGTGGCAAGAAAAGCAGCAGATCAGGAGACAAAAAATGGAAGCCCTCCGCTGGCTTGAGCGATGGAAAAGTCGGGGACATATTGGAGCTGCACACTGCCATGGGGTCATTGGATTTGCTGAAGAGTTACCAGAGTTAGCAGAATTTTCACTTTCAGATCTTCAAAATGCTACTTGCAATTTTTCTGAGAGCTTCAAAATGGCACAGGGAGGATATGGTTGTATTTACAAGGGGGAAATGCTGGGGAGAACAGTTGCTATAAGGAAGTTCCATCCACATAACACGCAAGGACCGACTGAGTTTCATCAAGAGGTTCAAGTTCTTGGTAGTCTCCAGCATCCTCATCTATTGACTTTGCTTGGTGTTTGCCCTGAAGCCTGGTCACTTGTGTATGAGTACTTGCCCAATGGGAGTCTTCAAGACCTCCTATTCCGGAAAAACAACAATTCCCCTCTGACATGGAATAGCCGAGCACGTATGATTGCTGAAATTGCCAGCGCTCTTTGCTTTTTACACACTTCCAAACCTAAAACTATTGTCCATGGTGACCTAAAGCCTGAAACGATACTTCTTGACTCTGCGCTTAGTTGCAAGATATGCGAATTTGGGTTCTGCATACTGTTGACTGAGGAGTCACTCTATCGTCCTAGTTTCAGATTCAGTGCTGAGCTAAAAAGAACTTCTACATATACAGATCCAGAGTTTGAGAGGACTGGAATACTAACACCAAAGTCTGATACCTATTCCTTTGGACTTATCATTTTGCAACTCCTCACCGGCAGGACTATTCCAGTTGGATTAGCAGGTGAGGTACGCAAGGCAGTATCGTGTGGAAAATTGTCATCAATTTTGGATTCTTCAGCTGGAGAATGGCCTCCAGCTGTGGCTACACAATTGGTTGAACTGGGACTGCAATGCTGTCAGCAACAAGGCAGAGAAAGACCAGAGCTAACACCCACTTTGGTGAGGGAATTGGAGCAATTGCATGTTTCAGAAGACCGGCCAGTGCCATCATTTTTCTTGTGTCCTATCCTTCAGGAAATAATGCATGATCCCCAGGTTGCAGCAGACGGATTCACTTACGAAGGGGAAGCCATACGTGAATGGCTAGAAAATGGTCATGAGACTTCTCCCATGACTAATTTAATATTGAATCACCTGCATCTGACGCCCAATCATGCGCTTCGTCTTGCAATTCAAGACTGGCTTTGCAAGTCCTGTAGTTCTTATTGA 2673 0.4519 MVGLRRLVWERNTGTRTRVGVSAKVKLVFQFGRKAIKEASSHNALSSLPHLTPLMELLNPSHPPHHQLSVVTGGPFHGSSPPLTLTSPFAFHGAATSQPPHPMAECTESVYVAVGKSVDKTAHLLQWTFGRFSNSEICILHVHQPSSMIPTLLGKLPATQANPEVVSAFRREEREHTMRLLENYMSICRAAKVKATSVIGEAEQVHKGIVDLIIKHGVRKLVIGAVPENRMKVKRNSKKANYAAKNAPPFCEIWFIHKGKLLWTREASENPCSLSSQSQPEVAASGRLITGSLQYNESELFHRSNSARTAICTGTGSWSQGEILETDATSSSKSSTCTSQCSPQNSTGCYLGTSSDVEEDRLLTLLAEAKIEVEAAKDKGLVELLKCKRLEAEAIEAINKVNILESAYTYEVKLRKEAESALQATVEEQQKLLDESEELATVLQRTMRNIALLDSRAQEANRRHDEAADELLLIQASISTLWQEKQQIRRQKMEALRWLERWKSRGHIGAAHCHGVIGFAEELPELAEFSLSDLQNATCNFSESFKMAQGGYGCIYKGEMLGRTVAIRKFHPHNTQGPTEFHQEVQVLGSLQHPHLLTLLGVCPEAWSLVYEYLPNGSLQDLLFRKNNNSPLTWNSRARMIAEIASALCFLHTSKPKTIVHGDLKPETILLDSALSCKICEFGFCILLTEESLYRPSFRFSAELKRTSTYTDPEFERTGILTPKSDTYSFGLIILQLLTGRTIPVGLAGEVRKAVSCGKLSSILDSSAGEWPPAVATQLVELGLQCCQQQGRERPELTPTLVRELEQLHVSEDRPVPSFFLCPILQEIMHDPQVAADGFTYEGEAIREWLENGHETSPMTNLILNHLHLTPNHALRLAIQDWLCKSCSSY 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0169 890 Coils Coil 359 379 - -
Alju10g0169 890 Gene3D Transferase(Phosphotransferase) domain 1 614 815 - -
Alju10g0169 890 Pfam Protein tyrosine and serine/threonine kinase 546 798 IPR001245 GO:0004672|GO:0006468
Alju10g0169 890 Coils Coil 415 470 - -
Alju10g0169 890 CDD RING-Ubox_WDSUB1-like 817 872 - -
Alju10g0169 890 SMART Ubox_2 819 882 IPR003613 GO:0004842|GO:0016567
Alju10g0169 890 ProSiteProfiles Protein kinase domain profile. 541 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g0169 890 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 816 887 IPR013083 -
Alju10g0169 890 Pfam U-box domain 816 885 IPR003613 GO:0004842|GO:0016567
Alju10g0169 890 Coils Coil 387 407 - -
Alju10g0169 890 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 127 231 - -
Alju10g0169 890 ProSiteProfiles U-box domain profile. 815 889 IPR003613 GO:0004842|GO:0016567
Alju10g0169 890 SUPERFAMILY Protein kinase-like (PK-like) 525 802 IPR011009 -
Alju10g0169 890 Coils Coil 890 890 - -
Alju10g0169 890 SUPERFAMILY RING/U-box 813 885 - -
Alju10g0169 890 PANTHER OS02G0152300 PROTEIN 110 881 - -
Alju10g0169 890 Gene3D Phosphorylase Kinase; domain 1 518 613 - -
Alju10g0169 890 Gene3D HUPs 109 254 IPR014729 -
Alju10g0169 890 CDD STK_N 109 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0169 Alju-ChrAlju10 1235451 1241322 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0169 108 883 U-box Gene Family AT2G45910 37.953 4.66e-178 534
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Alju10g0169 PK_Tyr_Ser-Thr 6e-32 CL0016