LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju10g0165	ATGAGGGCATGTGAGACTTTGAAGGAGTCCGCGATAGGGCATTTGGAAGAAGAAAATATCGCTGGTCGAAAAGAAGAAGAATATCGATTTCTGATTCGTGCTTCCATGAGGCACCAAGACAAGCATTCCTATAAACCCTTCACTTTCTCCACACCTCGGCCTCCTCTTTCTTCTCTCCTTTATCCCTCTTATGAATCTAGCCTCTTCCTTCAACCTCACTCCAAACTGTTTATTTCTGACATGGGAAGTTGTTTGGGCACCCAAATTAAAGCTGAGATCCAGTGTAACACAGCGCTGAATTCAATATACGTGAGCACAGATGGATGTGATCTGAGGAGCACAGGAAGTGATGTCTCAAAGGCCTCAGCGACTCATACTCGCCGGAGTGAGGGTGAAATCTTGCAGTCATCCAATTTGAAGAGCTTTTCTTATGCAGAACTGAAAGCGGCCACACGAAATTTCCGACACGATAGTGTTTTAGGAGAAGGTGGTTTTGGTTCAGTTTTCAAAGGATGGATTGATGAGCAGTCCCTTACTGCCGCCAAGCCAGGCACTGGCATTGTTATTACTGTGAAAAGACTCAAGCAAGATAGCTTGCAAGGTCACAATGAGTGGTTGGCTGAAGTGAATTTTCTGGGACAATTTTGTCATCCCCATCTAGTAAAGTTGATCGGGTATTGCCTTGAAGACGAACACCGTCTTCTGGTGTATGAATTTATGCCTCGAGGCAGCCTGGAGAATCATTTATTTAGGAGGGGCTCTTATTTCCAACCTCTCTCTTGGAGCCACCGTCTCAAGGTCGCTCTTGGTGCTGCCAGAGGGCTTGCATTTCTTCACAGTGCTGAAACAAAAGTGATATATAGGGACTTGAAGACCTCAAATATCTTGCTTGACTCAAATTACAATCCAAAACTTTCTGATTTTGGGCTGGCCAAGGATGGACCAGCAGAGGACAAAAGTCATGTCTCCACCAGAGTATTAGGAACCTATGGATATGCAGCTCCCGAATATCTAGCCACCGGTCACCTGACTGCAAAGAGTGATGTATATAGTTTCGGAGTGGTACTAGTAGAAATGTTGTCAGGCCGGCGAGCTATGGACAAGAGTCGACCATCAGGACAACGCAATTTGGTGGAGTGGGCTAAGCCATATCTAGCCAACAAACGTAAACTTTCTCGTGTGCTGGATACTCGTCTTGAAGGTCAGTATACAATAGAGGAGGCTCACAAGACAGCTACTCTGGCATTGCGATGCATTTCGACTGAACCCAAGATGAGGCCGACCATGGACGAGGTTGTTTCTGCATTGGAGCAGCTTGAAGTTCCCAATGTAAATGGAGGCAAACCAAAGCCTTCTGTGAATAGATCCAGTCGCAGAAAAAGTGAAGGCGACGTTAAGAATTATAAGACCACCACAGCTTATCCCCATCCATCTGCTTCCGCTCTCTATGCTTGA	1455	0.4591	MRACETLKESAIGHLEEENIAGRKEEEYRFLIRASMRHQDKHSYKPFTFSTPRPPLSSLLYPSYESSLFLQPHSKLFISDMGSCLGTQIKAEIQCNTALNSIYVSTDGCDLRSTGSDVSKASATHTRRSEGEILQSSNLKSFSYAELKAATRNFRHDSVLGEGGFGSVFKGWIDEQSLTAAKPGTGIVITVKRLKQDSLQGHNEWLAEVNFLGQFCHPHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLSWSHRLKVALGAARGLAFLHSAETKVIYRDLKTSNILLDSNYNPKLSDFGLAKDGPAEDKSHVSTRVLGTYGYAAPEYLATGHLTAKSDVYSFGVVLVEMLSGRRAMDKSRPSGQRNLVEWAKPYLANKRKLSRVLDTRLEGQYTIEEAHKTATLALRCISTEPKMRPTMDEVVSALEQLEVPNVNGGKPKPSVNRSSRRKSEGDVKNYKTTTAYPHPSASALYA	484

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju10g0165	484	SMART	serkin_6	154	439	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju10g0165	484	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	285	297	IPR008271	GO:0004672\|GO:0006468
	Alju10g0165	484	FunFam	Serine/threonine-protein kinase BIK1	121	239	-	-
	Alju10g0165	484	Gene3D	Phosphorylase Kinase; domain 1	128	239	-	-
	Alju10g0165	484	FunFam	Probable serine/threonine-protein kinase PBL8	240	455	-	-
	Alju10g0165	484	PANTHER	OS01G0588500 PROTEIN-RELATED	121	440	-	-
	Alju10g0165	484	Gene3D	Transferase(Phosphotransferase) domain 1	240	448	-	-
	Alju10g0165	484	CDD	STKc_IRAK	160	439	-	-
	Alju10g0165	484	ProSiteProfiles	Protein kinase domain profile.	154	439	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju10g0165	484	MobiDBLite	consensus disorder prediction	442	484	-	-
	Alju10g0165	484	Pfam	Protein tyrosine and serine/threonine kinase	157	436	IPR001245	GO:0004672\|GO:0006468
	Alju10g0165	484	ProSitePatterns	Protein kinases ATP-binding region signature.	160	182	IPR017441	GO:0005524
	Alju10g0165	484	SUPERFAMILY	Protein kinase-like (PK-like)	130	436	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju10g0165	Alju-ChrAlju10	1211288	1213968	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju10g0165	132	436	Glycoside Hydrolase	AT3G07070	49.020	2.41e-102	311

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-VIIa-2	Alju10g0165		PK_Tyr_Ser-Thr	1.3e-46	CL0016