Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0158 ATGGATCTTCACTTTGATGGAAGTCAAGGTTCTATAAATGGTTATAAACTTGATGATGGCGCCGCCAGCTCCGATTCAAACTATTTCCCGCATCCAGCCAACGATTGGGAACTCGACGATAACTATCGGAAACTTCTTAATCTCACAACCGATCCGTTGTATCAAACTTATGCGGCTCCGGTCAATTTTTCCCTGCACAGTAGCGTGAAATATGAAGAATCAGAGCGGTTAGTTTCATCCTCAACTATAAACCCTGTAGGAGGCATGTCAGATGTGGCAGCTGTGTCTAAAACTTCGCCGCCAGATCCTTCGCTGGAGGACGCTGACTTTTCAGAAACTATCAGGTACATAAGCCAAATGCTTATGGAAGAGAACTTTGAACAGAAACCAAGCATGTTTTATGATCCTCTGAGTCTACAAGTCACGGAGAAATCATTCTATGACGCTCTCAGAAAAGATCATCCTCTTTCCCCCAATCAGCATCCCCTAGACATTCATCAGAATCTTGATAGTGCAGATGATAACTGTTGTGGTGGTAATATTGACAGTAGCAGCACCAACAAGTCTCATGGCGCTAATACGCCCTCTTTCTCTGATGCTCCATTTTCTGGTGATTATGCGTCCCAGTTAAATTTTCAACCCATCTCTGAGAAACCCTCTCAACCTCTGAGTGCTTATACTTATATCAGCAGCGGATTGTCAGATGCGGATTCCTCTTTTACTAGGATCTTGGCTCAAAATATCTTTACTGATGCAGAATCTGTTTCACAATTTAAAAGGGGATTGGAAGAAGCTAGCAAGTTTCTTCCCAGAGGACTTCAACTTGTCACTGATCCGGAGAGCAACAATATGCTTCCAGAGTCAATGGGAGCGGCTGAAAAGGCAGTGGGAAATATTCGGGAGAATTCACATGGATTAAAGGGTAGGAAGAATCATGAACGTGAAGCTAGTGATACAGAAGAAGGGAGAAGTAACAAGCAGTCGGCAGTGTATGTGGACGATAGTGAGCTATCAGATATGTTTGATAAGGTGTTGCTTAGTGTTGAGAGTGTTCCATTAAGTGAGGAACACCACAAATGGTTGCAGAATGGAACAGACAAGGCCAATCAACCAAGTGAACAGCCAAATTCAACAAATGGGGCGAAGACCCGCGGCAGGAGACAAGGCAGGAAGAAGGAAACCGTGGATTTGAGGACTCTCATGGCTCTATGTGCGCAAGCTGTGTCTGCAAGTGACAGCAGAACTGCCAATGAACTACTAAAGCAGATTAGGCAGCATTCTTCCCCAATTGGTGATGCATCACAGAGGCTGGCTCACTACTTTACCAATGGCCTTGAGGCACGCTTGTTTGGCTGTGGTACTGGAACCCAAATATTCTATGCCTCTCTAAGCTCCAAGAGGATATCTGCTTCTCAAATCTTGAGAGCTTACAAAGTTCTAATATCTGTCTCCCCCTTCAGGAGGTTTGCATATTTTTTTGCAAATAAGATGATTTTTCACGCAGCTGAAAAGGCAGAAACTCTTCATATTGTCGATTTTGGCATTCAATATGGTTTCCAGTGGCCAATACTTATCAAGTTCCTTTCGCAAAGATCTGGTGGGCCTCCAAAGCTGCGCATTACAGGGATAGAATTGCCCCAAGCTGGGTTTCGTCCAGCAGAATTAATTGAGGAGACCGGTCGACGTCTATCTAATTATTGCAAACGTTTTAATGTTCCGTTTGAATACACAGCCATAGCATCACAAAACTGGGAAACCATCCCGCTAAAGGACTTTAAGATTGAGAGAAACGAACTGCTTGCTGTGAACTGTCTGCAGAGATTTAAGAATTTACTGGACGAGACAATTGAAGTGAAGAGTCCTAGAGATGCAGTTTTCAACTTGATCAGAAAGATGAATCCTGATATATTTGTTCAATCCATTGTGAATGGATCCTACAATGCCCCTTTCTTTGCGTCACGGTTCAAAGAGGCAATGTTCCATTATTCTGCAATGTATGATATATTTGACACTGTCATACCTCGTGAAAATGAATGGAGGCTGATGATTGAGAGAGAGTTTTTGGGTCGGGAGATCATGAATGTGGTTGCGTGTGAAGGGATCGAGAGGGTTGAGAGGCCTGAGACATACAAACACTGGCAAGTGAGGGGGACAAGGGCTGGTTTCAAGCGGCTGCCACTGCCAGAGGAGATAATGGTCAAATTCAGCAAAAAGTTGAAGGAATGGTATCACAGGGATTTTGTAATTGATGAAGACAACAACTGGATGCTTCAGGGCTGGAAGGGCCGCATCATTTGTGCTTCCACATGTTGGGTGCCATCATAA 2325 0.4396 MDLHFDGSQGSINGYKLDDGAASSDSNYFPHPANDWELDDNYRKLLNLTTDPLYQTYAAPVNFSLHSSVKYEESERLVSSSTINPVGGMSDVAAVSKTSPPDPSLEDADFSETIRYISQMLMEENFEQKPSMFYDPLSLQVTEKSFYDALRKDHPLSPNQHPLDIHQNLDSADDNCCGGNIDSSSTNKSHGANTPSFSDAPFSGDYASQLNFQPISEKPSQPLSAYTYISSGLSDADSSFTRILAQNIFTDAESVSQFKRGLEEASKFLPRGLQLVTDPESNNMLPESMGAAEKAVGNIRENSHGLKGRKNHEREASDTEEGRSNKQSAVYVDDSELSDMFDKVLLSVESVPLSEEHHKWLQNGTDKANQPSEQPNSTNGAKTRGRRQGRKKETVDLRTLMALCAQAVSASDSRTANELLKQIRQHSSPIGDASQRLAHYFTNGLEARLFGCGTGTQIFYASLSSKRISASQILRAYKVLISVSPFRRFAYFFANKMIFHAAEKAETLHIVDFGIQYGFQWPILIKFLSQRSGGPPKLRITGIELPQAGFRPAELIEETGRRLSNYCKRFNVPFEYTAIASQNWETIPLKDFKIERNELLAVNCLQRFKNLLDETIEVKSPRDAVFNLIRKMNPDIFVQSIVNGSYNAPFFASRFKEAMFHYSAMYDIFDTVIPRENEWRLMIEREFLGREIMNVVACEGIERVERPETYKHWQVRGTRAGFKRLPLPEEIMVKFSKKLKEWYHRDFVIDEDNNWMLQGWKGRIICASTCWVPS 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0158 774 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 329 761 IPR005202 -
Alju10g0158 774 MobiDBLite consensus disorder prediction 303 322 - -
Alju10g0158 774 ProSiteProfiles GRAS family profile. 388 772 IPR005202 -
Alju10g0158 774 Pfam GRAS domain family 398 771 IPR005202 -
Alju10g0158 774 MobiDBLite consensus disorder prediction 364 383 - -
Alju10g0158 774 MobiDBLite consensus disorder prediction 300 331 - -
Alju10g0158 774 MobiDBLite consensus disorder prediction 363 392 - -
Alju10g0158 774 MobiDBLite consensus disorder prediction 176 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0158 Alju-ChrAlju10 1172895 1175219 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0158 113 774 GRAS Transcription Factor Family AT1G07530 48.930 0.0 634
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Alju10g0158 GRAS 1e-110 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0095 02 860919 863213 Alju10g0158 10 1172895 1175219 CCT
Alju10g0158 10 1172895 1175219 Alju10g0158 10 1172895 1175219 ECH
Alju07g1356 07 38786424 38788202 Alju10g0158 10 1172895 1175219 ECH