Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0155 ATGATTCTGTCCCTCACTTTTTTCAAATTTGATATTGATTCTTCTTCATATACAATTTTCAGCCTTGATTATTTAGTAGTCATACTTATTGGTCCGGTTCTGGTTCAACTGGTATCTATGGATACTCTTCTGGAAATTTTTCCTGGTAGCCTAAATGAATTTAGATTTGAAAACGGTCATATTTCAGAATTTCCAAACCAGAACCCCATGAACGGCTTTACGCGTGATGATCAAGCCGACGCTTTGTCCTTTCCAACCACTTCAGAATTTCATAGTGAGTCGGGTCATTCTTCTAGCACGGGCACGAACGAAGAATCGTCAGACAGTAACAAATATTCCAATCCGGCTCTGAGATTCATAAGTGATATCCTCTTGGATGAAGAGGATGACCTGGAGCGCAAGCCTTGTATGTTGCAAGATTGCTTAGCACTCCGGGCTGCTGAAAAATCTTTCTACGATGCCCTCGGTCATAGTTACCCCTCTTCTCCTCGTCAATTCTCTAATTGCATCGATGGTGAAAACGCTGATAGCCCAGATGATCAAAGCTTCTTTCCTAGCCATAGTTTCGAGAGCTGCAGCAGCCATACCACTGATAATACATCTGACTCCGAGTGGGTGAACAGTGTTGTTAATTCCCCAGAAAACATCATCGACTTTTCAGATCTGCCTCCCGATCTATATGGAGGAACCCTTGATCGGAGCAACCTGCAGCTGAATCTTGGGGATTCCGTGCGAAACTCAGGATCCAGAGGAACAAGGGAAAAGAGAACCCATTGGATGGGTGATTCTATAAACGAAGAAGAGGGCAGAGGTAGCAAACTTTCTGCGGTCAGTTTAAATGATTCAGAGCCAACGGAAATGTTTGATGAAGTACTTCTCTGTAATCACAGAACCGATCAATCCCCGTCATGTGGTCCTGAACCATCTCAAAATGGCATATTCCATCTAAATATTGACTCAGGAGGATCAAATGGGAAGGCAACGCGTTCAAAGAAAGGGTCTAACAAAGGGACATCAGTGGATTTGTGGACTCTACTAACCCAATGTGCCCAAGCTGTTGCAAGCTTTGATCAAAGGAATGCCAATGAGCTTCTCAAGCAGATTAGGCAGCATTGTTCCCCTTTTGGCGATGGGCTTGAACGTTTAGCTTATTACTTTGCCAATGGTCTTGAGACGCGTTTGGCTGCTGGGACACCATCATATAACCCCAATGACAACGGAGCGACTGCTGCTGAGATGTTAAAAGCTTACAAACTATACATCACAGCTTCTCCTTTCCTCAGGATCTCAAATTTCTTGGCTAACAGAACAATTCTGAAGCTGGTAGAAGATGAAAGTAACCTTCATATTATTGATTTTGGCATTTGCTATGGTTTTCAGTGGCCTTGCCTTATCCAACGTCTTTCAGAAAGACAAGGTGGTCCCCCCAAGCTTCGTATCACAGGAATTGAGTTTCCTCAATCAGGGTTTCGCCCTGCAGAAAGGATTGAGGAGACAGGAAGAAGGTTAGCAAACTATTGCAGGAGGTTCAACGTCCCTTTCGAATACAATTGCTTCGCACAGAATTGGGAAACCATCCGGCTGGAGGATCTCAAGATCCACAGAAACGAAGTAACTGTGGTCAATTGTTTGTACAGATTGAAGAACGTGCCTGATGAAACTGTGTCTGTGAACTGTCCAAGGGATGCTGTTTTGAAGCTGATAAGGAAGATCAACCCCAACATGTTCATACATGGTGTTGTCAATGGCACCTTTAATGCACCATTTTTCGTCACTCGGTTCAGGGAGGCATTGTTTCACTACTCATCTTTGTTTGACATGTTTGAGGCCAACGTACCCCGGGAAGATCCAGAGAGGTTGTGGTTTGAGAAGGGGATCTTTGGAAGGGACGCCATGAATGTTTTAGCGTGCGAAGGGGCAGAAAGGGTTGAGAGGCCAGAGACTTACAAGCAGTGGCAGGTTAGGAATCGTAGAGCTGGCTTCAAGCAACTACGCATTGATGCACAAATCTTTAATAAAGCTCAAGAGATGGTGAAGACTGAATATCACAAAGATTTTGATGTGGATGAAGATGGCAGGTGGGTTTTGATGGGATGGAAAGGGCGTATCATTCATGCTCTTTCTATCTGGAAACCTGCTTAA 2142 0.4416 MILSLTFFKFDIDSSSYTIFSLDYLVVILIGPVLVQLVSMDTLLEIFPGSLNEFRFENGHISEFPNQNPMNGFTRDDQADALSFPTTSEFHSESGHSSSTGTNEESSDSNKYSNPALRFISDILLDEEDDLERKPCMLQDCLALRAAEKSFYDALGHSYPSSPRQFSNCIDGENADSPDDQSFFPSHSFESCSSHTTDNTSDSEWVNSVVNSPENIIDFSDLPPDLYGGTLDRSNLQLNLGDSVRNSGSRGTREKRTHWMGDSINEEEGRGSKLSAVSLNDSEPTEMFDEVLLCNHRTDQSPSCGPEPSQNGIFHLNIDSGGSNGKATRSKKGSNKGTSVDLWTLLTQCAQAVASFDQRNANELLKQIRQHCSPFGDGLERLAYYFANGLETRLAAGTPSYNPNDNGATAAEMLKAYKLYITASPFLRISNFLANRTILKLVEDESNLHIIDFGICYGFQWPCLIQRLSERQGGPPKLRITGIEFPQSGFRPAERIEETGRRLANYCRRFNVPFEYNCFAQNWETIRLEDLKIHRNEVTVVNCLYRLKNVPDETVSVNCPRDAVLKLIRKINPNMFIHGVVNGTFNAPFFVTRFREALFHYSSLFDMFEANVPREDPERLWFEKGIFGRDAMNVLACEGAERVERPETYKQWQVRNRRAGFKQLRIDAQIFNKAQEMVKTEYHKDFDVDEDGRWVLMGWKGRIIHALSIWKPA 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0155 713 Pfam GRAS domain family 344 711 IPR005202 -
Alju10g0155 713 MobiDBLite consensus disorder prediction 242 273 - -
Alju10g0155 713 MobiDBLite consensus disorder prediction 166 186 - -
Alju10g0155 713 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 263 703 IPR005202 -
Alju10g0155 713 MobiDBLite consensus disorder prediction 248 269 - -
Alju10g0155 713 MobiDBLite consensus disorder prediction 86 113 - -
Alju10g0155 713 ProSiteProfiles GRAS family profile. 333 711 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0155 Alju-ChrAlju10 1156562 1158900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0155 47 712 GRAS Transcription Factor Family AT2G29060 44.234 0.0 532
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Alju10g0155 GRAS 2.5e-114 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0093 02 852474 854767 Alju10g0155 10 1156562 1158900 CCT
Alju10g0155 10 1156562 1158900 Alju02g0095 02 860919 863213 CCT