Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0149 ATGAGTTTCGTCTTACGAGGGAGTAGAGGAGATATAGAAAGTGGATTTTCAGAATATGTTCCCGAAAGAACCACGATGCGTGTCCATCCAGCCCGGCCAATAAATAGCAATAATACTCTTGCTTTTCTCATTACAGTTATCTTGCTTTTTATGATGTTGAACTCTCCCCAGATGTCACATTTTTTGATGTGGCTTATGCTGGTTGTGTTTGTGATGGCCACAAGCCTGAGGATGTATGTAACTTGGCAACAGCTTCAAGCGCAAGCAAGGGCTCATGCCACAGCAGCTGAATTACAACTTCACGTGCCACCATCAATAGCAATTGCAACTAGAGGACGCTTGCAAGGACTCAGACTTCAGCTTGCACTTCTTGACCGTGAATTCGATGAGCTTGATAATGAAACTTTGAGGGCTCTGGAATCTGACACTGCTCCTAGTACCACTTCAATGACTGATGAAGAGATAAATGCCTTACCTGTTCACACATACAAAATTCCTGTCCCAACAAAGGATGGCTCAGCTGGGTTTGCATGCTCTTCGCACGCAACTGAGGTAAAGCAAGATAATGGAGGGAGAGAGGGAAATGTTAATGGTCCAGAAGAAGAGCTAACGTGTAGTATATGTTTGGAACAAGTCAAGAGAGGAGAGCTAGTCCGTAGCTTGCCATGTTTGCATCAGTTTCATATGAACTGCATCGATCCATGGCTGCGGCAGCAGGCAAAATGCCCTGTGTGTAAATTCAGGATGGGGTCTGGATGGCAGAGAAATAGTGGGGACAGTGACTCTGAAGGTTTAGATATTGTGTAG 807 0.4486 MSFVLRGSRGDIESGFSEYVPERTTMRVHPARPINSNNTLAFLITVILLFMMLNSPQMSHFLMWLMLVVFVMATSLRMYVTWQQLQAQARAHATAAELQLHVPPSIAIATRGRLQGLRLQLALLDREFDELDNETLRALESDTAPSTTSMTDEEINALPVHTYKIPVPTKDGSAGFACSSHATEVKQDNGGREGNVNGPEEELTCSICLEQVKRGELVRSLPCLHQFHMNCIDPWLRQQAKCPVCKFRMGSGWQRNSGDSDSEGLDIV 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0149 268 Pfam Ring finger domain 204 246 IPR001841 -
Alju10g0149 268 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 180 252 IPR013083 -
Alju10g0149 268 SUPERFAMILY RING/U-box 200 250 - -
Alju10g0149 268 CDD RING-H2_PA-TM-RING 204 246 - -
Alju10g0149 268 PANTHER TARGET OF ERK KINASE MPK-1 1 253 - -
Alju10g0149 268 SMART ring_2 205 245 IPR001841 -
Alju10g0149 268 ProSiteProfiles Zinc finger RING-type profile. 205 246 IPR001841 -
Alju10g0149 268 Coils Coil 114 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0149 Alju-ChrAlju10 1101482 1104052 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0149 1 268 C3H Transcription Factor Family AT3G55530 63.177 3.00e-109 315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju10g0149 10 1101482 1104052 Alju10g0149 10 1101482 1104052 ECH