Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0137 ATGGAGTCTGAAGATAAGGCAACATCCTCATCAGAAACAAAGCAAAGTGATGAGCAAGGAGCAAGTCAAGTGACAAGGTCGTACGAGTGTAGCTTCTGTAAAAGGGGATTCTCTAATGCACAAGCATTGGGAGGACACATGAACATTCACAGGAAAGACAAATCGAAACTGAAACAATCTTCCAACCAAACTCCTCCTCGTCGTCGTCGTCAGCCTGAATCTTCGGATGTTCACAGTAAGGTCGAAGCAGACAGAACCAGAGACAACGAAACCTCCGAACTTCACATAAAGCAGCTTCCTTTATTTGCAGAAACACCTAGTGGCGAAACACTAAAGCCAGAAGAATTAGATCATGTTCATGATAGAGGAATTGCTGAAGAAATCAAGGGCTCATCGTCATCGGATTTAGACCTTGAACTCAGACTAGGGCCTGACCCACCCTCTCCCACTACTGGTACCAGAAAATTTTTTTGA 474 0.443 MESEDKATSSSETKQSDEQGASQVTRSYECSFCKRGFSNAQALGGHMNIHRKDKSKLKQSSNQTPPRRRRQPESSDVHSKVEADRTRDNETSELHIKQLPLFAETPSGETLKPEELDHVHDRGIAEEIKGSSSSDLDLELRLGPDPPSPTTGTRKFF 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0137 157 PANTHER OS07G0101800 PROTEIN 1 146 - -
Alju10g0137 157 Gene3D Classic Zinc Finger 2 93 - -
Alju10g0137 157 MobiDBLite consensus disorder prediction 69 94 - -
Alju10g0137 157 SMART c2h2final6 28 50 IPR013087 -
Alju10g0137 157 MobiDBLite consensus disorder prediction 127 157 - -
Alju10g0137 157 ProSiteProfiles Zinc finger C2H2 type domain profile. 28 55 IPR013087 -
Alju10g0137 157 SUPERFAMILY beta-beta-alpha zinc fingers 26 55 IPR036236 -
Alju10g0137 157 MobiDBLite consensus disorder prediction 1 25 - -
Alju10g0137 157 Pfam C2H2-type zinc finger 28 52 - -
Alju10g0137 157 MobiDBLite consensus disorder prediction 41 111 - -
Alju10g0137 157 ProSitePatterns Zinc finger C2H2 type domain signature. 30 50 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0137 Alju-ChrAlju10 1045008 1045481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0137 25 153 C2H2 Transcription Factor Family AT3G53820 40.288 7.77e-21 81.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Alju10g0137 zf-C2H2_6 6.9e-06 CL0361