Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0130 ATGCTCGATTTGGACGATAGTAAGACTATGGCGCATAGGGTGGACCAGGAGTATGACTATCTGTTCAAGATCGTTTTGATCGGCGACTCTGGTGTGGGCAAATCCAACATTCTTTCCAGGTTTACCCGAAATGAATTTTGCTTGGACTCCAAATCTACGATTGGGGTTGAGTTCGCCACCCGTACTCTTCAGGTGGAAGGAAAGACTGTCAAGGCACAAATCTGGGACACAGCAGGTCAGGAGCGGTACCGCGCCATCACCAGTGCTTATTATAGAGGGGCTGTTGGTGCACTCCTCGTATATGACATAACTAAGAGGCAAACATTCGATAATGTTCAAAGGTGGCTCCGTGAATTGAGGGACCATGCAGATTCTAATATAGTAATCATGATGGCTGGAAACAAATCTGATTTGAGCAACCTTAGAGCTGTTTCTGAGGATGATGGTCAAGCATTGGCAGAGAAGGAAGGTCTTTCATTTCTTGAGACATCTGCTCTGGACGCAACCAACGTTGAAAAGGCATTCCAAACCATTTTGACAGAGATCTATCATATTGTGAGCAAAAAAGCACTGGCCGCTCAGGAAGCAGCAGCGAGTACCAATCTTCCTGGACAAGGAACCACGATCAATGTTGCAGATGCATCGGGGACTACTAAAAGAAGTTGCTGTTCCACCTAA 678 0.4617 MLDLDDSKTMAHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLDSKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLSNLRAVSEDDGQALAEKEGLSFLETSALDATNVEKAFQTILTEIYHIVSKKALAAQEAAASTNLPGQGTTINVADASGTTKRSCCST 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0130 225 Pfam Ras family 23 183 IPR001806 GO:0003924|GO:0005525
Alju10g0130 225 Gene3D - 14 223 IPR027417 -
Alju10g0130 225 PANTHER DRAB11-RELATED 15 211 - -
Alju10g0130 225 SMART ran_sub_2 27 225 - -
Alju10g0130 225 FunFam ras-related protein RABA1f 14 223 - -
Alju10g0130 225 ProSiteProfiles small GTPase Rho family profile. 15 197 - -
Alju10g0130 225 PRINTS Transforming protein P21 ras signature 160 182 - -
Alju10g0130 225 PRINTS Transforming protein P21 ras signature 22 43 - -
Alju10g0130 225 PRINTS Transforming protein P21 ras signature 125 138 - -
Alju10g0130 225 PRINTS Transforming protein P21 ras signature 63 85 - -
Alju10g0130 225 PRINTS Transforming protein P21 ras signature 45 61 - -
Alju10g0130 225 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 187 IPR027417 -
Alju10g0130 225 SMART rab_sub_5 22 185 - -
Alju10g0130 225 SMART ras_sub_4 19 185 - -
Alju10g0130 225 ProSiteProfiles small GTPase Ras family profile. 15 225 IPR001806 GO:0003924|GO:0005525
Alju10g0130 225 NCBIfam small GTP-binding protein domain 20 179 IPR005225 GO:0005525
Alju10g0130 225 SMART arf_sub_2 10 187 - -
Alju10g0130 225 SMART rho_sub_3 24 181 IPR001806 GO:0003924|GO:0005525
Alju10g0130 225 CDD Rab11_like 19 183 - -
Alju10g0130 225 ProSiteProfiles small GTPase Rab1 family profile. 17 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0130 Alju-ChrAlju10 1007573 1009280 Dispersed/Transposed