Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0122 ATGGGAGGTCGTTGCTCGAAATTCTCACTATGCTGGTGGTCCTCTAATATCAAATCAAATCTTCATGACTTGTCTGACAATGATGATGGGAACAAGAATGAGAAGCCTGGAATCATAGAATATAGCTTGGATCAACTAAGAAGTGCCACTTCTGGATTTTCACCCGATAACATTGTGTCAGAGCACGGTGAGAAAGCTCCCAATGTTGTCTATAAAGGGAAGCTTGAAGATGACGGGTGGGTTGCTGTGAAGCGCTTCAACAGGTCGGCTTGGCCTGATCCTCGACAATTCCTGGAGGAAGCACGAGCAGTGGGGCAGCTGCGGAATGAGCGATTGGCCAACTTAATTGGGTGTTGCTGCGAAGGGGAAGAGAGACTGCTTGTTGCTGAGTTTATGCCCAATGAAACTCTCTCCAAACATCTTTTTCATTGGGAGACCCAGCCTATGAAATGGGCAATGAGGCTGAGAGTGGCCTTTTACTTAGCACAGGCTTTGGAATACTGCAGTAGCAGAGGACGGGCATTGTACCACGATCTTAATGCTTATAGAATTCTGTTTGATCAGGATGGCAATCCCAGACTCTCCTGTTTTGGGCTCATGAAGAACAGCAGGGATGGCAAGAGTTATAGTACAAACTTAGCCTTCACCCCTCCAGAGTACTTGAGGACTGGAAGGATTACCCCAGAAAGTGTTATATACAGTTTTGGCACCCTTTTGCTTGATCTTCTCAGTGGCAAACATATTCCACCGAGTCATGCACTTGATCTTATACGAGGGAAAAACTTTTTGATGCTCATTGATTCATGTTTGGAAGGCCATTTTTCAAGTGATGATGGAACAGAACTAGTGAGATTAGCTTCACGTTGTTTACAGTATGAACCTCGTGAGAGGCCTAATGCCAAGTCACTCGTGACTGCTCTAGCTCCTCTTCAGAAAGAAACTTCTGTACCATCAAAAGTTTTGATGGGCTTACCAGATGGGATTGCATCAACAAGGGAAACAGTTTCATTGACACCTTTTGGCGAAGCTTGTTCTAGAAGAGACTTAACGGCAATACATGAAATTTTGGAAAAGGTTGGCTACAAGGATGACGAAGATGTTGCAAATGAGCTTTCATTCCAAATGTGGACGAATCAGATACAAGAAACTCTGAACTCTAAGAAGCAAGGAGATTCTGCTTTTCGTGCCAAAGACTTCTCTGCGGCCATTGACTGCTACACACAATTCATCGATGTAGGGACTATGGTATCGCCAACTGTGTATGCGAGGCGCTGCTTATGTTACTTGATGAACGACATGGCTCAAGAAGCTCTTGGAGATGCCATGCAAGCCCAATCAGTGTCGCCCACGTGGCACACTGCTTTCTATCTTCAAGCAGCTGCCCTCTTCAGCCTTGGAATGGACAATGACGCACAGGAAAGTCTTAAAGATGGCACAATGCTGGAAACTAGAAAGCATAGAAATTGA 1467 0.4506 MGGRCSKFSLCWWSSNIKSNLHDLSDNDDGNKNEKPGIIEYSLDQLRSATSGFSPDNIVSEHGEKAPNVVYKGKLEDDGWVAVKRFNRSAWPDPRQFLEEARAVGQLRNERLANLIGCCCEGEERLLVAEFMPNETLSKHLFHWETQPMKWAMRLRVAFYLAQALEYCSSRGRALYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRITPESVIYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLIDSCLEGHFSSDDGTELVRLASRCLQYEPRERPNAKSLVTALAPLQKETSVPSKVLMGLPDGIASTRETVSLTPFGEACSRRDLTAIHEILEKVGYKDDEDVANELSFQMWTNQIQETLNSKKQGDSAFRAKDFSAAIDCYTQFIDVGTMVSPTVYARRCLCYLMNDMAQEALGDAMQAQSVSPTWHTAFYLQAAALFSLGMDNDAQESLKDGTMLETRKHRN 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0122 488 FunFam probable serine/threonine-protein kinase At5g41260 133 324 - -
Alju10g0122 488 FunFam probable serine/threonine-protein kinase At4g35230 28 131 - -
Alju10g0122 488 Gene3D Tetratricopeptide repeat domain 381 487 IPR011990 GO:0005515
Alju10g0122 488 Pfam Protein tyrosine and serine/threonine kinase 70 307 IPR001245 GO:0004672|GO:0006468
Alju10g0122 488 FunFam probable serine/threonine-protein kinase At4g35230 381 488 - -
Alju10g0122 488 Gene3D Phosphorylase Kinase; domain 1 27 131 - -
Alju10g0122 488 Gene3D Transferase(Phosphotransferase) domain 1 133 324 - -
Alju10g0122 488 ProSiteProfiles Protein kinase domain profile. 56 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g0122 488 SUPERFAMILY TPR-like 385 484 IPR011990 GO:0005515
Alju10g0122 488 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 21 487 IPR045845 GO:0004672|GO:0009742
Alju10g0122 488 SUPERFAMILY Protein kinase-like (PK-like) 34 311 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0122 Alju-ChrAlju10 943921 947336 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0122 41 308 Glycoside Hydrolase AT3G07070 34.122 1.49e-40 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Alju10g0122 PK_Tyr_Ser-Thr 1.1e-26 CL0016