Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0114 ATGAGGAAGCCCGAATCTGGAAAAAACAACAATAACAATAACAAGCTGAGGAAGGGGCTGTGGTCACCGGAAGAAGATGACAAGCTAATGAACTACATGCTAAACAATGGACAAGGTTGTTGGAGTGATGTGGCCAGGAATGCTGGCTTGCAACGATGTGGCAAAAGTTGTCGCCTTCGTTGGATCAATTACTTGAGGCCTGATCTTAAGCGCGGTGCTTTCTCTCCCCAGGAAGAAGAGCTCATCATCCATCTTCATTCCCTTCTCGGCAACAGATGGTCCCAAATAGCGGCGCGCTTGCCCGGGCGAACCGACAACGAAATCAAGAATTTCTGGAACTCCACAATAAAGAAAAGGCTCAAGCTCATGTCATCATCCACCACCCCAACCTCACAAAATGCAAGCGAGTCTTCTTCCTTATTATCTGAGCATAATATTAAAGACCTCAACAATGTCATGGGAGGTTTCATGCCTATGTTCAACAACAACCTAATTGATAGATTGCCTTTGCTCGAGCATGGACTAAACACGCAAGCAGCTAATTCTGACGGATTCTTCAACACTAATAATGGAGGGCCTTGCTTCACACAAAATGGGGCTGACCACAACAACAATATTAATAATGGTTTTTATGTAGAAAATGGAGTTTTTGGGATCGGGAGTGTAAATATTGGAGCAGAAGGGGAGCTGTTTGTGCCTCCTCTAGAGAGTGTTAACACTATAACTGATAACCTGCAGAAACTGGAGAATAGGGACACTAACGTTAATAGTTACTTGGACAACATAAACGGCATCGTTAATAACTGCAACAATAATAATAATAGAGCTGAGAATAGAGGTGGCGTGATGGAGAATCTTTTTCAGGAAGAGTTAACTTTGGGAGAGTGGGACTTAGAGTACTTGATGAAAGATGTTTCATCCTTTCCCTTTCTTGATTTCTCAAGCTGA 948 0.4304 MRKPESGKNNNNNNKLRKGLWSPEEDDKLMNYMLNNGQGCWSDVARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEELIIHLHSLLGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLKLMSSSTTPTSQNASESSSLLSEHNIKDLNNVMGGFMPMFNNNLIDRLPLLEHGLNTQAANSDGFFNTNNGGPCFTQNGADHNNNINNGFYVENGVFGIGSVNIGAEGELFVPPLESVNTITDNLQKLENRDTNVNSYLDNINGIVNNCNNNNNRAENRGGVMENLFQEELTLGEWDLEYLMKDVSSFPFLDFSS 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0114 315 ProSiteProfiles Myb-like domain profile. 66 116 IPR001005 -
Alju10g0114 315 MobiDBLite consensus disorder prediction 1 20 - -
Alju10g0114 315 FunFam Transcription factor MYB46 72 145 - -
Alju10g0114 315 Gene3D - 72 144 - -
Alju10g0114 315 Coils Coil 259 279 - -
Alju10g0114 315 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 65 IPR017930 -
Alju10g0114 315 SMART sant 70 118 IPR001005 -
Alju10g0114 315 SMART sant 17 67 IPR001005 -
Alju10g0114 315 SUPERFAMILY Homeodomain-like 16 112 IPR009057 -
Alju10g0114 315 CDD SANT 21 65 IPR001005 -
Alju10g0114 315 Pfam Myb-like DNA-binding domain 18 65 IPR001005 -
Alju10g0114 315 Pfam Myb-like DNA-binding domain 71 114 IPR001005 -
Alju10g0114 315 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 120 IPR017930 -
Alju10g0114 315 FunFam MYB transcription factor 15 71 - -
Alju10g0114 315 ProSiteProfiles Myb-like domain profile. 13 65 IPR001005 -
Alju10g0114 315 CDD SANT 73 113 IPR001005 -
Alju10g0114 315 Gene3D - 15 71 - -
Alju10g0114 315 PANTHER MYB DOMAIN PROTEIN 55 10 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0114 Alju-ChrAlju10 894895 896744 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0114 1 310 MYB Transcription Factor Family AT5G12870 48.265 2.57e-82 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju10g0114 Myb_DNA-binding 3.6e-12 CL0123