Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0106 ATGGGCTCAATGAACTCAAACAACTGGCTTTCTTTCCCTCTTTCCCCTACTCAGTCTTCCTTGCCACCACAACTCCAAGCCACACAGTCACATCAGTTTTCTCTTGGCCTAGTCAATGATTCCATCGAAAACCCATTCCAAAATCACGATTGGAATCTGATGAATACACATACACACGGGGGGAGCAACGTGAATGAAGTGCCGAAGGTAGCAGATTTTCTAGGAGTGGGCAAGTCTGAGAATCAGTCAGATCTTGCAGCCTTTAATGAAATTCATCACTCGAATGATTCGGGTTACCTATTCACAAACACCAGTCTGGTACCGCCGATGCAAACCTCAGTGGTGGCCACATCTGCCAACTTCGAGTATCAAGAAAACAACAATGCTAACACTAACCTCCAGTCTTTGACATTATCCATGGGTAGTGGTGGTAAGGATTCTACCTGTGAAACTAGCGGTGACAATAGTACCAATACTGCTGTCGAAACTGCTGCCCCTCGAAGAACTTTAGATACATTCGGTCAGAGAACTTCAATCTATCGAGGTGTAACCAGACATAGATGGACTGGAAGGTATGAAGCTCATCTTTGGGACAATAGTTGTAGAAGGGAAGGACAATCACGAAAGGGACGACAAGCTAACATTTTGATTATTATTTTTCTTCTCTCTTTGGTTGTCTTGCTTCTCTTTCGGCCGAGTTCTTGCAGTCTATTTGGTGTTGGCCCCTTTTTGACAGGTGGATATGACAAAGAAGAGAAAGCAGCTAGGGCCTACGATTTAGCGGCACTAAAGTACTGGGGAACATCCACAACTACCAACTTTCCAATCAGTAACTATGAGAAGGAACTGGAGGAGATGAAGCACATGACAAGACAAGAATTTGTGGCCGCTATACGAAGAAAGAGCAGTGGGTTCTCTAGGGGTGCATCAATGTATCGCGGAGTCACAAGGCACCATCAGCATGGTAGATGGCAGGCAAGGATCGGTAGAGTTGCGGGAAACAAAGATCTTTACTTGGGAACTTTCAGTACTGAGGAAGAAGCTGCAGAAGCATACGACATAGCGGCGATCAAGTTCAGAGGACTAAACGCAGTGACAAACTTCGACATGAGCCGTTACGACGTGAAAGCCATACTTGAGAGCAACACTCTTCCAATCGGAGGAGGAGCTGCTAAACGACTGAAGGAAGCTCAAGCTCTGGAATGTTCCAGAAAAAGAGAGGAAATGATAGCTCTCGGGTCGACCTTCCAATACGGCAGCGGGAGCGGCGGCGGCAGCGGCTCAAGCCGGCTTCAACTACAAGCCTACCCTCTGATGCAGTTGGATCAGACGCAGCCATTGTTAAGCCTACAAAACCAGGCGGAGATATCTCAGTACTCGTCACTTCATCATCCCAGTTATATCCAAACTCAGCTCCAGTTGCACCACCAAACTGCTTCTTCGTCTAACTATAACTTTCACCAATCGCCGAGTAATAATGCTCAGCTGTATAATAGCTATCTTCAGAACCACCCGGCTCTGCTTCAGGGTTTGATGAACATGGGTTCTTGTTCTTCTTCTGTGATGGACAATGATGGAGGAGGGTCTAGTGGGAGTTACAGTGGTGGTGGAGGAGGGTTTATGGGGATGGCTTCTAATACGACGTCAGGTGGATCCGCGGAGGAGCTGGCGTTGGTCAAGGTTGAAAACTACAACATGCCGTCCGGTGGTTACGGCGGCGGCTGGCCGTCCGAGTCCATGCAGGGATCCAATGCTGCTCTCTTTACAATGTGGAATGACTGA 1782 0.4759 MGSMNSNNWLSFPLSPTQSSLPPQLQATQSHQFSLGLVNDSIENPFQNHDWNLMNTHTHGGSNVNEVPKVADFLGVGKSENQSDLAAFNEIHHSNDSGYLFTNTSLVPPMQTSVVATSANFEYQENNNANTNLQSLTLSMGSGGKDSTCETSGDNSTNTAVETAAPRRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQANILIIIFLLSLVVLLLFRPSSCSLFGVGPFLTGGYDKEEKAARAYDLAALKYWGTSTTTNFPISNYEKELEEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKAILESNTLPIGGGAAKRLKEAQALECSRKREEMIALGSTFQYGSGSGGGSGSSRLQLQAYPLMQLDQTQPLLSLQNQAEISQYSSLHHPSYIQTQLQLHHQTASSSNYNFHQSPSNNAQLYNSYLQNHPALLQGLMNMGSCSSSVMDNDGGGSSGSYSGGGGGFMGMASNTTSGGSAEELALVKVENYNMPSGGYGGGWPSESMQGSNAALFTMWND 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0106 593 CDD AP2 178 277 IPR001471 GO:0003700|GO:0006355
Alju10g0106 593 SUPERFAMILY DNA-binding domain 310 371 IPR016177 GO:0003677
Alju10g0106 593 Pfam AP2 domain 312 361 IPR001471 GO:0003700|GO:0006355
Alju10g0106 593 SUPERFAMILY DNA-binding domain 244 277 IPR016177 GO:0003677
Alju10g0106 593 SMART rav1_2 311 375 IPR001471 GO:0003700|GO:0006355
Alju10g0106 593 SMART rav1_2 179 281 IPR001471 GO:0003700|GO:0006355
Alju10g0106 593 CDD AP2 310 371 IPR001471 GO:0003700|GO:0006355
Alju10g0106 593 ProSiteProfiles AP2/ERF domain profile. 311 369 IPR001471 GO:0003700|GO:0006355
Alju10g0106 593 Gene3D AP2/ERF domain 179 277 IPR036955 GO:0003700|GO:0006355
Alju10g0106 593 ProSiteProfiles AP2/ERF domain profile. 179 275 IPR001471 GO:0003700|GO:0006355
Alju10g0106 593 Gene3D AP2/ERF domain 311 371 IPR036955 GO:0003700|GO:0006355
Alju10g0106 593 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 114 460 - -
Alju10g0106 593 FunFam AP2-like ethylene-responsive transcription factor 310 371 - -
Alju10g0106 593 PRINTS Ethylene responsive element binding protein signature 180 191 IPR001471 GO:0003700|GO:0006355
Alju10g0106 593 PRINTS Ethylene responsive element binding protein signature 257 277 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0106 Alju-ChrAlju10 824432 827184 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0106 4 593 AP2-EREBP Transcription Factor Family AT1G51190 60.353 0.0 651
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju10g0106 AP2 5.7e-10 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju10g0106 10 824432 827184 Alju10g0106 10 824432 827184 ECH