Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0058 ATGAAAATCCAGTGCGATGTGTGTGAGAAGGCTCCGGCAACGGTGATTTGTTGCGCCGACGAGGCTGCTTTATGTGCTAAATGCGACATTGAAGTTCATGCTGCCAACAAGCTAGCTAGCAAGCACCAGAGGCTTCTCCTTCAGTGCCTCTCTACCAAGCTTCCCACTTGTGACATCTGCCAAGACAAGCCAGCTTTTATATTTTGTGTTGAAGACAGAGCACTGTTCTGTGAAGCTTGTGATGAACCAATTCATTCAGCCGGCAGCCTTTCTGCAAACCACCAGCGCTTCCTTGCAACTGGTATTCGGGTGGCTCTGAGTTCTAACTGCGCCAAGGACAATGAAGGACGTCGCTTGGAGCCACCAAATCGAAGTGCTCAACAAGCTTCTACAAAAGTCCCTCCTCAGCCCCAGCAAGTCCCTACCTTCCCATCCTCTTGGGCTGTGGATGACTTGTTGGAGTTCACTGACTTCGAATCACCTGACAAGGTTCAGAAGGAATCACTGGAGTTTGGAGAGCTAGAGTGGTTATCGGAGGTGGGCCTTTTTGGAGAACAATTTCCTGGGGAGGCATTGGCTGCAGCTGAAGTTCCACAGCTTCCAGTAACACAAACTAGCAATGTTGCCTCATACAGACCCTCCAAGTCCTTCATGTCTCTCAAAAAGCCCAGGATTGAATTTGAAGACGATGATGAGCACTTCACTGTGCCTGATCTTGGTTGA 723 0.4938 MKIQCDVCEKAPATVICCADEAALCAKCDIEVHAANKLASKHQRLLLQCLSTKLPTCDICQDKPAFIFCVEDRALFCEACDEPIHSAGSLSANHQRFLATGIRVALSSNCAKDNEGRRLEPPNRSAQQASTKVPPQPQQVPTFPSSWAVDDLLEFTDFESPDKVQKESLEFGELEWLSEVGLFGEQFPGEALAAAEVPQLPVTQTSNVASYRPSKSFMSLKKPRIEFEDDDEHFTVPDLG 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0058 240 Pfam B-box zinc finger 53 95 IPR000315 GO:0008270
Alju10g0058 240 CDD Bbox1_BBX-like 5 47 - -
Alju10g0058 240 MobiDBLite consensus disorder prediction 113 141 - -
Alju10g0058 240 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 239 - -
Alju10g0058 240 SMART bboxneu5 4 47 IPR000315 GO:0008270
Alju10g0058 240 SMART bboxneu5 52 99 IPR000315 GO:0008270
Alju10g0058 240 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Alju10g0058 240 Gene3D Classic Zinc Finger 1 129 - -
Alju10g0058 240 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
Alju10g0058 240 CDD Bbox1_BBX-like 57 98 - -
Alju10g0058 240 MobiDBLite consensus disorder prediction 121 136 - -
Alju10g0058 240 Coils Coil 238 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0058 Alju-ChrAlju10 458278 459783 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0058 1 164 Orphan Transcription Factor Family AT1G06040 65.497 5.09e-70 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Alju10g0058 zf-B_box 6.2e-08 No_clan