Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Alju10g0033 | ATGGGTCCTTGCAAGCATTTCTCACTGGTGGCCTTGGGAATAGTATCAAACCCCGCTGGTAGCGCTGGCAGAGCAACCATGAATAACAATGACCGCATCCACAGCAGGCGGGAAGAAGATCAAAGCAAAGCAGATAGTACCGTCACAAGCCATGACTCCAGATTCAACCAGACCCTCAGAAATGTTCAAGGCTTGCTGAAAGGTCGTAGCATCCCTGGTAAAATATTATTGACTCGAAGACTTGACCCACCGGATAACTCAACCTCGAAGGAATATTCGCCAAGATACGAAAGGAGCTTCTCCTTCAATGATGCTGGCACAAGTGATCACCCAGCTAAGGCTACAGAGGAAGAAGTACAGAGTACAAGTAAACCAGCCAGTGTTTCCAATGTGAATAAGTTAAAAAAATCAAGTTCTGACAGGGACAACTCATCTGAAGAAGTCCAGAAATCTTTCATGGGTGCAAGAGCTACAGACTCTGCGAGAGTTATGAAGTTCACTAAGGTGCTTTCTGGGTCGACAGTAATATTAGAGAAGTTGCGTGAATTATCTTGGAGTGGAGTTCCAGATTACATGCGCCCTACAGTGTGGAGGCTTCTCTTGGGATATGCACCAACTAATTCAGATAGAAGGGAGGGTGTTCTGAGAAGGAAGCGCCTGGAGTATCTTGACTGTGTTTCTCAGTATTATGATATTCCTGATACACAACGTTCAGATGATGAGATTAACATGCTTCGCCAGATTGCTGTTGATTGTCCAAGAACTGTACCTGATGTTTCATTCTTCCAGCAACCACAAGTTCAGAAATCATTGGAGCGCATTCTTTATACATGGGCCATTCGGCATCCTGCAAGTGGATATGTTCAGGGAATTAATGATCTTGTTACGCCGTTTTTAGTTGTTTTCCTATCAGAATACGTAGAAGGGAGTATAGACAATTGGTCAATGTCTGATTTATCCTCAGATAAAATTTATAATGTAGAGGCTGACTGTTATTGGTGCTTGTCAAAGTTACTTGATGGTATGCAAGACCATTACACATTCGCTCAACCAGGAATTCAGAGGCTTGTTTTTAAGTTGAAGGAAGTGGTCAGAAGAATAGATGAGCCTGTTTCTAGACATGTGGAGGAACAAGGACTGGAATTTCTTCAATTTGCTTTCCGCTGGTTCAACTGTCTTCTTATCCGTGAGATACCCTTCCATCTCATCACACGCCTTTGGGACACATATCTTGCTGAAGGAGATGCTTTACCAGATTTCCTTGTGTACATATTTGCCAGTTTTCTTCTGACGTGGTCAGATAAGCTCCAGAAGCTTGATTTCCAAGAGCTGGTAATGTTCCTTCAACACCTTCCAACTCAAAACTGGTCTCACCAAGAGCTTGAGATGGTGCTCTCTCGCGCTTTCATGTGGCACAGCATGTTCAACAACTCTCCCAGCCATTTAGCTAGCTAA | 1455 | 0.4364 | MGPCKHFSLVALGIVSNPAGSAGRATMNNNDRIHSRREEDQSKADSTVTSHDSRFNQTLRNVQGLLKGRSIPGKILLTRRLDPPDNSTSKEYSPRYERSFSFNDAGTSDHPAKATEEEVQSTSKPASVSNVNKLKKSSSDRDNSSEEVQKSFMGARATDSARVMKFTKVLSGSTVILEKLRELSWSGVPDYMRPTVWRLLLGYAPTNSDRREGVLRRKRLEYLDCVSQYYDIPDTQRSDDEINMLRQIAVDCPRTVPDVSFFQQPQVQKSLERILYTWAIRHPASGYVQGINDLVTPFLVVFLSEYVEGSIDNWSMSDLSSDKIYNVEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKEVVRRIDEPVSRHVEEQGLEFLQFAFRWFNCLLIREIPFHLITRLWDTYLAEGDALPDFLVYIFASFLLTWSDKLQKLDFQELVMFLQHLPTQNWSHQELEMVLSRAFMWHSMFNNSPSHLAS | 484 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Alju10g0033 | 484 | Gene3D | putative rabgap domain of human tbc1 domain family member 14 like domains | 223 | 348 | - | - | |
| Alju10g0033 | 484 | FunFam | TBC domain containing protein | 217 | 348 | - | - | |
| Alju10g0033 | 484 | FunFam | TBC1 domain family member | 161 | 213 | - | - | |
| Alju10g0033 | 484 | FunFam | TBC domain containing protein | 349 | 484 | - | - | |
| Alju10g0033 | 484 | MobiDBLite | consensus disorder prediction | 30 | 47 | - | - | |
| Alju10g0033 | 484 | SUPERFAMILY | Ypt/Rab-GAP domain of gyp1p | 350 | 472 | IPR035969 | - | |
| Alju10g0033 | 484 | Gene3D | - | 349 | 484 | - | - | |
| Alju10g0033 | 484 | MobiDBLite | consensus disorder prediction | 118 | 134 | - | - | |
| Alju10g0033 | 484 | Pfam | Rab-GTPase-TBC domain | 191 | 435 | IPR000195 | - | |
| Alju10g0033 | 484 | MobiDBLite | consensus disorder prediction | 87 | 108 | - | - | |
| Alju10g0033 | 484 | MobiDBLite | consensus disorder prediction | 18 | 51 | - | - | |
| Alju10g0033 | 484 | ProSiteProfiles | TBC/rab GAP domain profile. | 187 | 414 | IPR000195 | - | |
| Alju10g0033 | 484 | MobiDBLite | consensus disorder prediction | 76 | 152 | - | - | |
| Alju10g0033 | 484 | PANTHER | TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN | 137 | 457 | - | - | |
| Alju10g0033 | 484 | Gene3D | - | 164 | 215 | - | - | |
| Alju10g0033 | 484 | SMART | tbc_4 | 184 | 440 | IPR000195 | - | |
| Alju10g0033 | 484 | SUPERFAMILY | Ypt/Rab-GAP domain of gyp1p | 166 | 374 | IPR035969 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Alju10g0033 | Alju-ChrAlju10 | 296707 | 306259 | Proximal |