Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0019 ATGAACCCCTACATGATGGATTTGACCCTGGATTTCCTGGTTCCGTCTTTGTGGGAGATCAAAGTTACAGTGGCCACCTCCATGTTTGTGATAATCGCCTATTGGTTTTTCACGTACAGAACTGGAGACTTTGATGTTGGTCGAGTACTCGTTGACAATTCCGGGGATGCTTCTGACGACAAGGACAAGATGGTCCAGTTTAAAGGAGATTCTCAGACCAATTCGGCATATTTGATTAAGTTGGAACTTTTGGCTGCTAAGAATCTTATTGGTGCAAATTTAAATGGCACGTCAGATCCTTATGCTATCATTACATGTGGCAATGAGAAGCGATTCAGTTCCATGGTTCCTGGTTCAAGAAATCCTATGTGGGGTGAAGAATTCAATTTCTCTGTTGATGAACTTCCTGTCCAGATTAATATTACGATATATGATTGGGATATTATTTGGAAAAGTGCTGTTCTAGGTTCAGTGACTGTTCCAGTTGAAAGTGAAGGTCAAACTGGTGCAGTATGGTATACATTAGATAGCCCATCAGGGCAGGTTTGCCTTCACATAAAAACAAGAAAACTGCCTGCAAATTCTTCCAGGATCAATGGCTATGGCGGACCCAACACTCGAAGAAGGATGCCCACAGAAAAGCAAGGGCCAACTGTTGTTCATCAAAAGCCAGGGCCACTTCAGACAATATTTAATCTTCTTCCGGATGAGGTTGTTGAACATAGTTATTCGTGTGCACTAGAGAGGTCATTTTTGTATCATGGTCGTATGTATGTCTCAGCATGGCATATTTGCTTCCATTCTAATGTGTTCTCAAAGCAAATGAAGGTGGTTATTCCATTTGAGGATATAGATGAGATTCGAAGGAGTCAGCATGCATTTATTAATCCTTCAATAACAATTATTCTTCGCATGGGTGCGGGTGGACATGGTGTACCTCCTTTGGGAAGTCCTGATGGTAGAGTAAGATATAAATTTGCGTCATTTTGGAATAGAAATCATACATTTAGAAATTTACAACGTGCAGCAAAGATTTTCCGTGAAATGCTGGAAGCTGAGAAGAAGGAAAATGCAGAGTCAGAATTGCGTGCTCATAGTAGTTCTGTTAGGGGAAATAAGATACCGGATAAGGTTCCTGAAGAAAACATGGGAAAAACTGGAAAGTCTCAACCTTTTGTCAAAGAAGAGGCTTTAGTTGGTATATATAATGATGTTTTCCCTTCCAAGCCTGAGCAGTTCTTTAACTTGTTATTTAACGATGATTCAAATTTTACAAGCGAGTATCGTTCAGTACGAAAGGATACTAATCTAGTGATGGGACAGTGGCATACATCAGATGAATATGATGGTCAAGTCAGAGAGATAACCTTCAGAACTCTTTGTAACAGTCCTATGTGCCCTCCGGACACTGCCATGACAGAGTGGCAACATGTCGTTCTATCGCCAGACAGGAAAAAATTGGTGTTTGAAACCGTCCAACAGGCACATGATGTACCATTTGGGTCCTATTTTGAGGTGCATTGTAAATGGAGTTTGGAGACAATTAATGAAAGTTCAAGTACATTGGACATTAAAGTGGGTGCGCATTTTAAGAAATGGTGTGTGATGCAATCTAAAATCAAGTCAGGGGCAGTCAATGAGTACAAGAAAGAAGTCGATGTGATGTTAGAAGTTGCCCGATCTTATGTAAAGAACAACGCTTCTGGTGGTGAGATTGGCATGGCGGTTTCACCCCCTGCAACTTCTGACAGCTCCTAA 1758 0.4107 MNPYMMDLTLDFLVPSLWEIKVTVATSMFVIIAYWFFTYRTGDFDVGRVLVDNSGDASDDKDKMVQFKGDSQTNSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGNEKRFSSMVPGSRNPMWGEEFNFSVDELPVQINITIYDWDIIWKSAVLGSVTVPVESEGQTGAVWYTLDSPSGQVCLHIKTRKLPANSSRINGYGGPNTRRRMPTEKQGPTVVHQKPGPLQTIFNLLPDEVVEHSYSCALERSFLYHGRMYVSAWHICFHSNVFSKQMKVVIPFEDIDEIRRSQHAFINPSITIILRMGAGGHGVPPLGSPDGRVRYKFASFWNRNHTFRNLQRAAKIFREMLEAEKKENAESELRAHSSSVRGNKIPDKVPEENMGKTGKSQPFVKEEALVGIYNDVFPSKPEQFFNLLFNDDSNFTSEYRSVRKDTNLVMGQWHTSDEYDGQVREITFRTLCNSPMCPPDTAMTEWQHVVLSPDRKKLVFETVQQAHDVPFGSYFEVHCKWSLETINESSSTLDIKVGAHFKKWCVMQSKIKSGAVNEYKKEVDVMLEVARSYVKNNASGGEIGMAVSPPATSDSS 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0019 585 PANTHER BAG-ASSOCIATED GRAM PROTEIN 1 5 571 IPR044655 -
Alju10g0019 585 Pfam C2 domain 80 175 IPR000008 -
Alju10g0019 585 Gene3D - 226 344 IPR011993 -
Alju10g0019 585 PRINTS C2 domain signature 139 147 IPR000008 -
Alju10g0019 585 PRINTS C2 domain signature 94 106 IPR000008 -
Alju10g0019 585 PRINTS C2 domain signature 118 131 IPR000008 -
Alju10g0019 585 Pfam VAD1 Analog of StAR-related lipid transfer domain 401 546 IPR031968 -
Alju10g0019 585 SMART gram2001c 225 291 IPR004182 -
Alju10g0019 585 FunFam BAG-associated GRAM protein 1 isoform X2 226 345 - -
Alju10g0019 585 Gene3D C2 domain 61 191 IPR035892 -
Alju10g0019 585 CDD PH-GRAM_C2-GRAM 236 344 - -
Alju10g0019 585 ProSiteProfiles C2 domain profile. 59 175 IPR000008 -
Alju10g0019 585 Coils Coil 336 356 - -
Alju10g0019 585 ProSiteProfiles VASt domain profile. 397 567 IPR031968 -
Alju10g0019 585 MobiDBLite consensus disorder prediction 357 388 - -
Alju10g0019 585 CDD C2 79 175 - -
Alju10g0019 585 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 77 187 IPR035892 -
Alju10g0019 585 SMART C2_3c 78 174 IPR000008 -
Alju10g0019 585 Pfam GRAM domain 228 300 IPR004182 -
Alju10g0019 585 MobiDBLite consensus disorder prediction 195 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0019 Alju-ChrAlju10 202729 218112 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0019 53 163 C2H2 Transcription Factor Family AT4G21160 25.225 1.21e-06 48.9