Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0004 ATGGTTAGATTGTCAAAGATTTCACCTGACAAAACAAGGCTGGTGCAGCCTGGGGCTAACATTGACCTTTCAAGCTTGTACATGGCACCAGAGATTTACAAAGATGATACGTTTGAGAGAAGTGTGGATGCATATTCCTTTGGTCTCATTGTATATGAGATGATAGAGGGTATACAGCCCTTACACCCGAAGCCTCCGGAGGTGGCCTTGAAACTTATGTGCATAGAAGGAAAAAGGCCACCATTCAAAATCAAAACAAAAAGTTATCCTCCAGATTTGAGAGAGTTGATTGAGGAATGTTGGAACCCAGAACCTCTTGTCAGACCTACATTTTCGGAAGTCATTGTGCGATTGGACAAAATTGTTGCAAACTGCTCAAAACAAGGGTGGTGGAAAGATACTTTCAAGCTTCCTTGGAAATAA 423 0.4184 MVRLSKISPDKTRLVQPGANIDLSSLYMAPEIYKDDTFERSVDAYSFGLIVYEMIEGIQPLHPKPPEVALKLMCIEGKRPPFKIKTKSYPPDLRELIEECWNPEPLVRPTFSEVIVRLDKIVANCSKQGWWKDTFKLPWK 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0004 140 Gene3D Transferase(Phosphotransferase) domain 1 3 135 - -
Alju10g0004 140 ProSiteProfiles Protein kinase domain profile. 1 122 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g0004 140 Pfam Protein tyrosine and serine/threonine kinase 19 117 IPR001245 GO:0004672|GO:0006468
Alju10g0004 140 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 25 121 - -
Alju10g0004 140 SUPERFAMILY Protein kinase-like (PK-like) 24 125 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0004 Alju-ChrAlju10 58080 67395 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0004 1 140 MAP Kinase Kinase Kinase AT2G31800 65.714 2.02e-69 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Alju10g0004 PK_Tyr_Ser-Thr 8.6e-15 CL0016