Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0002 ATGGCATCCAGTAATATGACAATGCCCGCGGCTTACGACCTTGTCTGTCTCCTCTCACTTGTCTTGTCCCTGGCAGTGTCTTCCTCGGCCACCGGCCGGATCCTCCATCAACCATTTTTCCCCGAGGGCTCCATCCCTCCCGACTCTTCTCCAACTCCAACTCCAACTCCAACTCCAACCCACAAGGCTTTCTTCCCTTCTTACCATTCCCCACCAACCCCTCCTCCTCCCACCCCTCTCTCCACATTTCCCGCCAACATCTCCTCCCTACTCTTCCCCCAACCCTCTTCCCCCCACCGCCACCCTGTCATTGCCATCGCTGTGTCTGCCTCCCTTCTCTCCGTTGCTCTCCTCGCCCTTCTTGCCTTGTTCATTTACTACCGTAATAAATATACCACTCCTCCTCACAAGGTTTCAAGATCTGACAGTCTACGATTATACCCTCCAAACACTCTTACCTCCGATGCTATTGCCAGTCATAAGCCTCCCTCACCATCCTCCAGCTCCAATTTTCTCTACCTGGGCACCGTGGTCAATTCACGAGAAGCTTGTATGGGCACTTCTGCCGCACCAGATCGAAAACTGTGCTCGCCCGAACTCAAACCGCTCCCGCCATTGCCCCGTCACAGAAACAGGGCCACTGGCGAAGATGATGAAGAAGAGGAGTTCTACTCTCCAAAAGGGTCTTCAGGCCGCACACCCAGTCCTGTGGAAGTTCTTCGGCGGGGAATGGATAGACTTGGCATTGGGAGTAGAAGCTTCAATTCCGCAACAAATTCTGCATCGTTCACTTCTTCCCTTTGTTTGAATTTGAGCCCCAGGAACTCTTTGGAGCCTCTGCGCCCCATGACACCCTCCTCACCCGACATTGATTGTAATTTTCCAGTCTCAGAACAGAGGAACAAGCCCCCATCACCTCTGCCGCTTGCGCCTCCACTCTTTTGGGAAACATCTCCCAATAACAACGAGGATGCTCGAAAGCTAAAGTTGAAACCTTTGCACTGGGATAAAGTTAGGGCCAGCTCGGATCGGGCCATGGTTTGGGATGACTTAAAACCGGGTTCTTTCCAGCAAGAGGAACACGTTCATATCACTGGAATGGCAGATACGAACACGTTTTATCTGATATGGCGGCATGAAGATGATATGATTTGTATCTTTGCATTTAAGAGAGTTGATGCAATGCTTTACATTTCTAACTTCGATTCAGAATCAGAATACCTCAGGAAGTCCTTTGAGACTTTGGAGGTGGCTTGTGAGGAATTAAGGAATAGCAGATTTTTTTTTTTTCTGAAGCTCCTTAAAGCAGTGCTGAGAACTGGAAATCGCATGAATGTTGGCACCAATTGTGGTGATTCACATGAATTCAAGCTGGACAAGCTTATGAAGCTAGTTCATATTAAAGGGGCTGATGGAAAGACAACTCTCTCGCATTTTGTTGTGCAGGAAATGGTCAGAACTGAAGGTTCTCGAATATCTGGTTTGAGTAGGGAGCTCTGCAATGTAAAAAAAGCAGCTACAATGGATTCAAATATGCTTAGCAGTGGTGTCTCTAAGCTTGCCAGAGGGATTGCAAAAGTTGCAGAAGTTAAAAAATTGAACGGAGAGTCGCCTTTGAGAGACACTAGCCATAAAATTTCTGAGGCAATGGATGGTTTCTTGAAGAAGGGAGAGGAGGAAATTGTTTCGATTCAGGCCCAAGAGAAGAATGCTTTGTCTTCAGTGAAGAAGCTAACGGAGTATTTCCAGGGAAATTCTTCCAAGGAAGAAGCTCATCCGTTTAGGACTTTTATGGCCGTGAGGGATTTCCTTTCAATACTTGATCGTGTGTGCAAGGAAGTTGGCAAAGTAAACGAGAGAACTTTAGTCGGCTTCCGTCAATACTCGGAGCCTGCAAATCCAATCCTGCCACCAATTTTCCCTGAGATTGTTGGTTCCTTGGACGATCAAAACTCCTCTCGCTCATCATAG 1971 0.4784 MASSNMTMPAAYDLVCLLSLVLSLAVSSSATGRILHQPFFPEGSIPPDSSPTPTPTPTPTHKAFFPSYHSPPTPPPPTPLSTFPANISSLLFPQPSSPHRHPVIAIAVSASLLSVALLALLALFIYYRNKYTTPPHKVSRSDSLRLYPPNTLTSDAIASHKPPSPSSSSNFLYLGTVVNSREACMGTSAAPDRKLCSPELKPLPPLPRHRNRATGEDDEEEEFYSPKGSSGRTPSPVEVLRRGMDRLGIGSRSFNSATNSASFTSSLCLNLSPRNSLEPLRPMTPSSPDIDCNFPVSEQRNKPPSPLPLAPPLFWETSPNNNEDARKLKLKPLHWDKVRASSDRAMVWDDLKPGSFQQEEHVHITGMADTNTFYLIWRHEDDMICIFAFKRVDAMLYISNFDSESEYLRKSFETLEVACEELRNSRFFFFLKLLKAVLRTGNRMNVGTNCGDSHEFKLDKLMKLVHIKGADGKTTLSHFVVQEMVRTEGSRISGLSRELCNVKKAATMDSNMLSSGVSKLARGIAKVAEVKKLNGESPLRDTSHKISEAMDGFLKKGEEEIVSIQAQEKNALSSVKKLTEYFQGNSSKEEAHPFRTFMAVRDFLSILDRVCKEVGKVNERTLVGFRQYSEPANPILPPIFPEIVGSLDDQNSSRSS 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0002 656 Pfam Formin Homology 2 Domain 387 607 IPR015425 -
Alju10g0002 656 MobiDBLite consensus disorder prediction 41 77 - -
Alju10g0002 656 MobiDBLite consensus disorder prediction 279 306 - -
Alju10g0002 656 PANTHER FORMIN-RELATED 387 642 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Alju10g0002 656 Gene3D Formin, FH2 domain 389 623 IPR042201 -
Alju10g0002 656 ProSiteProfiles Formin homology-2 (FH2) domain profile. 234 633 IPR015425 -
Alju10g0002 656 MobiDBLite consensus disorder prediction 188 237 - -
Alju10g0002 656 MobiDBLite consensus disorder prediction 44 60 - -
Alju10g0002 656 SMART it6_source 320 622 IPR015425 -
Alju10g0002 656 SUPERFAMILY Formin homology 2 domain (FH2 domain) 71 620 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0002 Alju-ChrAlju10 47072 50156 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0002 387 645 FH2 protein (formin) Gene Family AT3G25500 60.357 2.10e-103 336