Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju1000590g0008 ATGGCAGCTCCACGACAGTCTATTCAGGAGATGATTCCAAATCTCCCGGAGGAAAATATAGGTGAGGAAGATTTAAACCCAATATGTCTTATTTGTCCCAGTGATATGTTAGCAGCAACAAGCAAACTTCAGCAGCAAGCCACAGAAATCCGTGCGCAGCACATCAACTGGCAGTCTTACATGCAGATTTCTATTAGGAAAAAAAGCTTTAGTAACATTTACTGTAGAATTGAGTGTGTGCGATTGGGACAGGCCATGGCTCAGGAGCGGAAAAATTCTTCACCTTCGGAGGAGAAAAGTCAAGCTGCTTCTTTTTCCCCTGAGTATCTCCGGAACAATGAGTATGTACAGTCAGTGGGACGTTGCTTACAAATGATGCTCCGTATTGATGAGTATCGCCTAGCCTTTGTGGCAGTGGATGGTATTTCCACCATCATATCTGTCCTGCGTGGGCGAGTCAACTTCCAAGTTCAGTACCAACTGGTCTTTTGCTTGTGGGTGCTTACTTTCAACCCTCTTCTTGCAGAAAAAATGAACAAATTTAATGTGATTCCCATTCTTGCTGATATATTGAGTGATTCGGTGAAGGAGAAAGTGACTCGTATCATTCTGGCAGTGTTCCGGAATATGATTGAGAAGCCAACTGACAGCCAAACATCCAAGGATCATTGCATTGCAATGGTTTCAAGCAAAGTATTGAAGCAGCTGAGCATTTTGGAACAACGTAAATTTGATGATGAGGATATTGTAGCTGACATTGAATTTTTGAATGAGCGCCTACAGGCCTCAGTACAAGACCTGAGCTCCTTTGATGAGTACGCCACCGAATTGAAATCAGGCCGTCTTGAATGGAGCCCTGTCCACCGGTCAGCTCAGTTTTGGAGGGAAAATGCTGGGCGCCTTAATGAGAAAAATTATGAGTTACTACGTATTCTGAATCACCTTCTGCAGAACAGCCATGATCCTCTTGTGTTAGCTGTTGCTGCATTTGATATTGGGGAGTATGTTCGCCACTATCCTCGGGGAAAGCACGTCATTGAACAGCTTGGAAGTAAGCAAGTGGTTATGCAGCTTCTTGCTCACGATGATCCAAATGTTCGTTATGAAGCTCTGCTTGCAGTTCAGAAATTAATGGTTCACAACTGGGAGTACCTTGGACGACAGCTAGAAAAGGAACAAGACAACAAGGCCCCTGGGAGCAAACCTGCTGCAGGAGGAAGTGCTGTCCCAGCAAAAGCATATGGTACCGTGCGGGTACCACCAGGCGGCGAAGCTGGCGCAAGCTGGTGGCAGCGGCCGGGGGCGTTGTTCACTGCCGAGCGGAACGGAAATGTCGAAGCGGCGGCGGGGCCCTGGCGGGGCCCAAGGGGGGCTCAGCGGGCTCAGCCTAGCTCGGCCGGGGCAGGGGCCGGGGGTCGGCAGGGCCCGCGACCCGCAATGCTTGCACACTCCGTTCCGATCCGGGGCCCCGCGCCTTGCCGCCTTGCCTCGCCGCCTCGCGTGCTGGCGTCCTCGCGGTACTACATCAAGCTACTCAGGCGGGGAGCAGCAGGTTGA 1557 0.5029 MAAPRQSIQEMIPNLPEENIGEEDLNPICLICPSDMLAATSKLQQQATEIRAQHINWQSYMQISIRKKSFSNIYCRIECVRLGQAMAQERKNSSPSEEKSQAASFSPEYLRNNEYVQSVGRCLQMMLRIDEYRLAFVAVDGISTIISVLRGRVNFQVQYQLVFCLWVLTFNPLLAEKMNKFNVIPILADILSDSVKEKVTRIILAVFRNMIEKPTDSQTSKDHCIAMVSSKVLKQLSILEQRKFDDEDIVADIEFLNERLQASVQDLSSFDEYATELKSGRLEWSPVHRSAQFWRENAGRLNEKNYELLRILNHLLQNSHDPLVLAVAAFDIGEYVRHYPRGKHVIEQLGSKQVVMQLLAHDDPNVRYEALLAVQKLMVHNWEYLGRQLEKEQDNKAPGSKPAAGGSAVPAKAYGTVRVPPGGEAGASWWQRPGALFTAERNGNVEAAAGPWRGPRGAQRAQPSSAGAGAGGRQGPRPAMLAHSVPIRGPAPCRLASPPRVLASSRYYIKLLRRGAAG 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju1000590g0008 518 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 97 385 IPR004908 GO:0000221|GO:0046961|GO:1902600
Alju1000590g0008 518 MobiDBLite consensus disorder prediction 447 483 - -
Alju1000590g0008 518 FunFam V-type proton ATPase subunit H 280 382 - -
Alju1000590g0008 518 Gene3D - 280 382 IPR038497 -
Alju1000590g0008 518 SUPERFAMILY ARM repeat 35 383 IPR016024 -
Alju1000590g0008 518 Gene3D - 67 268 IPR011989 -
Alju1000590g0008 518 Pfam V-ATPase subunit H 267 382 IPR011987 GO:0000221|GO:1902600
Alju1000590g0008 518 Pfam V-ATPase subunit H 111 260 IPR004908 GO:0000221|GO:0046961|GO:1902600
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju1000590g0008 122 379 Primary Pumps ATPases(2) AT3G42050 29.885 3.47e-42 154