Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju1000590g0005 ATGCGACGTTTCCCAGCACTAGGAGACGACATGCACACAGACAATGGCGAACTAGGCCAAAGGTTGCGTCATAACCTGGAAAACGTGAGGCACTTTGATGATATGAGGCTTCAGGATGGCCAAGGGTCTCAACTAACTGGCCTTCCTGAACGGAGTACGACCTGGCGGAACTCGGTTGTTGGCAAAGGTTCCTTTGGTGTTGTTCATAAAGGAATATGGAGAGGCAAGAATGTAGCAGTGAAAAGAATCGAAACAGAGTCAGAGCGGAAAGCCTTACGTGTGGAGGTCCATCAACTTTCTCGAGTTTCCCACAGAAATATTGTCAAACTCTATGGAGCCTGTATAGATGAGCAACAAAATCCAGTATGTCTTGTTATGGAGTATGCAGAGGGTGGCTCTCTTTATAATGTTTTGCATGGACGCCCTCAAAGGAGGTACACTGCTGGCCATGCAATCAGTTGGGCACTTCAGTGTGCCTGTGGGGTCTCATACTTACATAACATGAAACCAAAAGCACTCATCCACAGGGATCTGAAGTCTCCTAATTTATTACTAGTGCTCGGAGGGAAATTGCTTAAAATCTGTGATTTTGGCACTGCATGTGATATAAGCACTTACATGACAAACAATAAAGGCAGTGCTGCTTGGATGGCTCCAGAAGTGTTTGAAGGAAGCCAGTATACAGAAAAATGTGATGTTTATAGTTGGGGTATTATTTTATGGGAAGTATTGAGTCGGCGGAAACCTTTTAGTGAAAGTGGTACTGCCTTTCGCATCCTGTGGGAGGTTCATAAAGGAAGTCGCCCTCCTCGAATTCAAGGATGTCCAAAACCTGTAGAAGAAATAATGACAAGATGTTGGGACCAGGATCCCAATCTAAGGCCATCTATGGACTATGTTGTCAACTACATGTTAAAATTGATTGAATTCTTTGGAAATTATGACACCCCTATAGAGGAGCTGACAGAGCAAGACACAATTGAGGAAAATGAAGAGGAAGAGGATGATGAAGTTTGTTTTACGGGTCCACGCACAGGTGTTACTATATCTTCTAGTGTTAATGGTTATAGTAATGACACTGGGCAGAGAAGAGAGCCTCCAATGCCCAGAACTTTGGATGCATCCAATTTATCTCCTCTATCAATAGAGGTAGATCCTGTACCTGAGGGGCCAGAGCTAAGTTTTGCTGCTCCAAGTCAATGCAATGGTGGTGTTAATCCCATTGGAAATTCTTCCAGTCAGTCTAGGACAATGCAGTGTCGGAAGTCCGAACTGGCAAGGAGGTCGAGAGAGTGCGAGGAGATGGGGGCAGACACCAGCACTGCTGCGGACGCAGCGGCGTAG 1344 0.4539 MRRFPALGDDMHTDNGELGQRLRHNLENVRHFDDMRLQDGQGSQLTGLPERSTTWRNSVVGKGSFGVVHKGIWRGKNVAVKRIETESERKALRVEVHQLSRVSHRNIVKLYGACIDEQQNPVCLVMEYAEGGSLYNVLHGRPQRRYTAGHAISWALQCACGVSYLHNMKPKALIHRDLKSPNLLLVLGGKLLKICDFGTACDISTYMTNNKGSAAWMAPEVFEGSQYTEKCDVYSWGIILWEVLSRRKPFSESGTAFRILWEVHKGSRPPRIQGCPKPVEEIMTRCWDQDPNLRPSMDYVVNYMLKLIEFFGNYDTPIEELTEQDTIEENEEEEDDEVCFTGPRTGVTISSSVNGYSNDTGQRREPPMPRTLDASNLSPLSIEVDPVPEGPELSFAAPSQCNGGVNPIGNSSSQSRTMQCRKSELARRSRECEEMGADTSTAADAAA 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju1000590g0005 447 SMART serkin_6 56 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju1000590g0005 447 MobiDBLite consensus disorder prediction 399 420 - -
Alju1000590g0005 447 MobiDBLite consensus disorder prediction 349 447 - -
Alju1000590g0005 447 MobiDBLite consensus disorder prediction 421 437 - -
Alju1000590g0005 447 Gene3D Phosphorylase Kinase; domain 1 52 130 - -
Alju1000590g0005 447 SUPERFAMILY Protein kinase-like (PK-like) 57 304 IPR011009 -
Alju1000590g0005 447 Pfam Protein tyrosine and serine/threonine kinase 58 302 IPR001245 GO:0004672|GO:0006468
Alju1000590g0005 447 PRINTS Tyrosine kinase catalytic domain signature 126 139 IPR001245 GO:0004672|GO:0006468
Alju1000590g0005 447 PRINTS Tyrosine kinase catalytic domain signature 167 185 IPR001245 GO:0004672|GO:0006468
Alju1000590g0005 447 PRINTS Tyrosine kinase catalytic domain signature 275 297 IPR001245 GO:0004672|GO:0006468
Alju1000590g0005 447 PRINTS Tyrosine kinase catalytic domain signature 212 222 IPR001245 GO:0004672|GO:0006468
Alju1000590g0005 447 PRINTS Tyrosine kinase catalytic domain signature 231 253 IPR001245 GO:0004672|GO:0006468
Alju1000590g0005 447 Gene3D Transferase(Phosphotransferase) domain 1 131 344 - -
Alju1000590g0005 447 CDD STKc_TAK1 60 311 - -
Alju1000590g0005 447 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Alju1000590g0005 447 FunFam Mitogen-activated protein kinase kinase kinase 7 131 348 - -
Alju1000590g0005 447 ProSitePatterns Protein kinases ATP-binding region signature. 60 81 IPR017441 GO:0005524
Alju1000590g0005 447 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7 57 440 IPR017421 GO:0000287|GO:0004709|GO:0007165
Alju1000590g0005 447 ProSiteProfiles Protein kinase domain profile. 54 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju1000590g0005 61 304 MAP Kinase Kinase Kinase AT2G24360 38.281 7.01e-45 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Alju1000590g0005 PK_Tyr_Ser-Thr 1.1e-61 CL0016