Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju1000590g0003 ATGCCCCCGACCAAGACGGAGCTCCTGGTGCCACGCAGAGGGGCTGCAACGTCAGCTGTCCGGTGCTGTCGTTACAGCGCGTCGCATTACCTGTTGCAGCTTGCCCAGGAGTATCTGAAGGTGCAAACGCAGATGGCCTACTTGTCAAGGCACAAGGAAGATCTCATGGAGAAGCTCAGTGAGGCAGAGGGCTTAAGTCAGCTAGATCAGCAGGACACTGAGCAGCAGCAGGAACTGTTGCGCAAGCTCACTGACGAAAAGGTTTTAGAAGTTGTTGCAGAATTTTTACCTGCTTTGCTTTATTTCTTATTATTAATTTTTATCTCAGAGCTCATTAAATTCACCACTGCTCTCATGTTTACAGGAAAACCTTTTGCAGCTACGCCAAAATTTAATGCGTCAGCTAGATTTGATACGATGCAAACAAAACAGCAGCCAAGAAGATGGTTGGGTGGTGGTTCCACATCAGGATTAAGGAGTGTTGCAGTTTTACCAAGTCCTACAGGATTCAAAATTGACAGCCCTCAAAAGAGAATGAAGAATGGGCTTTCTCTAGCTGAGAAATTAATTGAACAACCACCACTCTCCATGAAAGGAGTTGGCATGGATTTGAGTGGATGTCCAAAATTTGTAAACTCTGAGTGGGCAACTGGGTATGAATGGCTTTCACTGAGGCACATGATAGTTTTGTTCATGAAATGTGAAATGGTAATCATTACTGGATTACTACACTACATATTGTATCTTGTATTTCAGTTTGCGACCGTGTACAAAGCAAGAGACACTGAGACGGACAACATAGTTGCTGTGAAGAAGGTTTATGTGTTTGGACATATGTCAAATGTGTCATTGGTATTTGACTTCATGGACTATGATATGGAGGTAGTCATTAAGGACACAAACATCGTTATGACTCCAGCAAACATTAAAGCCTACATGCTGCAAACCCTGCAAGGCCTAGAATACTTACACAACAATTGGGTTTTACACAGAGATCTCAAGCCAAATAATCTTCTTGTTAATAGCCAAGGAATTTTAAAGATTGGAGATTTTGGTCTGGCGAAGTTTTTTGGCTCTCCAAATAGAGTTTATACTCATCAAGTAGTCACCAGATGGTACAGAGCACCTGAGTTACTGTATGGAGCCCGAATGTATGGAACCAGTGTTGATATGTGGGCTGTTGGCTGCATACTTGCAGAACTTCTCCTTCGAGTACCATTTCTCCCTGGTGATACTGACCTGGACCAACTTTCACGTATATTTTCAGTAATGGGGACACCTACTGAAGAGACTTGGCCTGGATTCACTTCCCTTCAGGATTTCGTTCAGTTTAAACCAATGCCCAGTCAACCCCTGAGAAATATATTCTCAGCTGCAGGGGATGATTTATTAGATCTCATATCTAGCCTATTAACCATAAACCCTCTGGCCCGGTGTACTTGTGAGCAAGCATTACAAATGCCCTACTTCAGCAACAAACCAGCTCCGACACCTGGACCACAGTTACCTTTACCAGCATCCGTCAATGGGAAAAAGCAAGAGGATAGGCCTAGCCTGAAACGGAAATTATTGGATGCTGTTGATGGAGGTAAGGCAAATTGTTTTTGA 1608 0.4347 MPPTKTELLVPRRGAATSAVRCCRYSASHYLLQLAQEYLKVQTQMAYLSRHKEDLMEKLSEAEGLSQLDQQDTEQQQELLRKLTDEKVLEVVAEFLPALLYFLLLIFISELIKFTTALMFTGKPFAATPKFNASARFDTMQTKQQPRRWLGGGSTSGLRSVAVLPSPTGFKIDSPQKRMKNGLSLAEKLIEQPPLSMKGVGMDLSGCPKFVNSEWATGYEWLSLRHMIVLFMKCEMVIITGLLHYILYLVFQFATVYKARDTETDNIVAVKKVYVFGHMSNVSLVFDFMDYDMEVVIKDTNIVMTPANIKAYMLQTLQGLEYLHNNWVLHRDLKPNNLLVNSQGILKIGDFGLAKFFGSPNRVYTHQVVTRWYRAPELLYGARMYGTSVDMWAVGCILAELLLRVPFLPGDTDLDQLSRIFSVMGTPTEETWPGFTSLQDFVQFKPMPSQPLRNIFSAAGDDLLDLISSLLTINPLARCTCEQALQMPYFSNKPAPTPGPQLPLPASVNGKKQEDRPSLKRKLLDAVDGGKANCF 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju1000590g0003 535 ProSiteProfiles Protein kinase domain profile. 144 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju1000590g0003 535 Pfam Protein kinase domain 275 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju1000590g0003 535 PANTHER CELL DIVISION PROTEIN KINASE 281 494 - -
Alju1000590g0003 535 Gene3D Phosphorylase Kinase; domain 1 263 288 - -
Alju1000590g0003 535 ProSitePatterns Serine/Threonine protein kinases active-site signature. 328 340 IPR008271 GO:0004672|GO:0006468
Alju1000590g0003 535 Gene3D Transferase(Phosphotransferase) domain 1 289 490 - -
Alju1000590g0003 535 CDD STKc_CDK7 252 503 IPR037770 GO:0005675|GO:0008353|GO:0070985
Alju1000590g0003 535 MobiDBLite consensus disorder prediction 492 519 - -
Alju1000590g0003 535 SMART serkin_6 245 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju1000590g0003 535 FunFam Putative cyclin-dependent kinase 7 291 506 - -
Alju1000590g0003 535 SUPERFAMILY Protein kinase-like (PK-like) 253 496 IPR011009 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju1000590g0003 253 505 Core Cell Cycle Gene Families AT1G18040 48.772 6.67e-99 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK7 Alju1000590g0003 Pkinase 3.3e-51 CL0016