Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju1000579g0007 ATGAGGACAGTCGTAAGTCCGAGAAATTTGGCTGGTACTTTCATATCACCGAAAGTCAGCCCAAATATTGCCCTTCGTCATGGGCAAGGAAAGACTGGCACCCAGCATTCTTTGTCTACTCTACATTCACGGAGTAAATCTGTTGCCGTTAAAATTATAAAGTCAAGTCTGAATGTGATGAGACAACTTGAAAATGAAGCAAATTGCTTAGGGCTATACCATTCCAACATAGTGTCCACCATTAAGGTATTACCACCTTGTAATGAAGTTCCTGGCATCGTCATTATGGAAAGAGTTGTAGGTTACTCTTTGGAAATGCTTCTGGATTATGATTTTCTTAGAAATAGAAAAGAGCAGAGAGTGAGGTATAGCATGCACATCTGTTCTGCCCTTGCTTATTGCCATCAACATGGGGTTCTGCACCTTGATGTTAAACCTCAGAACATTCTTGTAGACTTACTTACGGATACCTGTAAATTGTGTGATTTTGGTTGTTCTTATAAAATTGGAACAGAAGCATTACCTCAGCTACCACCGGGAACTGCTGGATATGCTGCTCCAGAAATTTTACAAGGAAGCAAACCATCCACTGCTGCAGACGTTTATTCTCTAGGAATAACAATGTGGCAGCTGTTGTCTGGAGAGGCTCCTTTCAAAGATATGAGGGCTCACACAGTCATTTACAAAGTGGTAGCATCAGAATAAACTCACGATGATTCGAGAAACTTGCTGAATCCCAATGCCGGCATGCGCGAAAAGAAAACGAGCATGAGCAACCGGCGAAAGAAAATCATAACAAATCAGAATATTCCAGCAGATGGCGTTGGTGTTTGCTTGCCGCTTGGCGCCACCCTTTGCGCAATGAATTTGTTGAGTGCAATCAGAACCTGCCATGCGGTGTCAAAATGTTGCAAGGAGTCTGTTGCCATTGAGAAAGTTGGGAGTAGCTCTACAATGTCAGGGCAAGTATTGTCATCAGTGTCCATACTGATTGCTGAGTTTATCCATGACTATCCCTTTCATGTTTGCTGTGCTATGCTTTTCAGTAAAATGACAGAGACTATCTTTCTTTACAGAGAAAATGAGTTACAGACTGATTTTATTGTACCTAAAACACCAGTTCAAAGAGCTGTACTCCAGACCTCACAGATATGTTGTGAATCTGACTCAGAGGACTTATTTGCATCTGATACTTCAGAGTGTGGTGATGAAAACTTCCCAAGCAACATAAATGCTCTATTGAGTGGACCAGAACCCTCAAACTTATCATGGACCAGTTCGATGGCTACTCCTGTGGCAGGCAATGTAACCTGGTCCAATTTGAATACTGAGGAACGTAAAGTCTTTTTACCAAATAAGGCAGAGATGAATAATGTTACCCCTAAACTGCTTCAAAGAAGAAGCACAACAGGTCATAAAATATCTATTGATACTCCACTTGCAATGCATTCATCTCCCCACAATATGTCAGCATTTGCACAGCAGGTAGATGAAGGTATTGAAAAAGTCACCTCTGGATCACCTATTCTGTCTGGAAGTGGTGAGTTCAAAAAGACTCCAGCACAATATGAAGAAATCTTTCCAGAAGAAAATGACTTATTTGATAATGTTGAATCTATAGATGGTATTATTTCTTGTAATGAAACTACCAAAGAGAATAGTGCTGCAGAATCTACTCCTAACCCAGAGAGTAGGAGTAGATCTCCTCTTAGTATGGAAAAAGAATTTGTAGAATCAGAGCTAATAGAACTTGTCACTAGCAACTCATCAGAAAAAGCCTCAAGAGCTCAAAAGAGAGGCAACTCTGCAATATCTTCAACTCCAGGGAAGCACCTAGATGCCAAAAGAAGGCGCCTTCTTTTCTCTTCTTGTGATACTACTATCAACTCTTCAAAGTTACTATTTAAAGCACCAGAAACTAAGCTCCATGATGAAGCAGTTCTGAATCATGTAGAAGATATTGCTGCTGAATTGATACCCGATGACTCATTCTCAGAACATTTGGCAGCTATAAATACATCTATTTTTTCTGACCCAATAGCTCCTTTGACTAAAGTGCAGGCAATTAAATCATCAGTTTCTCACATGAAGAAGTTTTGCTACACAATTGATGAGCGAAAGTCTGTGCCAGATGACAAGAAGGCTTGCTTGCCAACCACACCCCAAGATCTCATGGAAGAAATAATTAAATCGGTCTTAGCCCAAGAGACAGCAAAAGCAGTTACTGTTAAGGCTAAACCAGTGTTGCCTAGTGGAGATCTAATAGTATTTAGTCAGATGGTTAGCAAGGAGGAAGATCAAACTGAAAATCAACTGGAAACGACTGATGCGCCTGGACTTTCCTTGATGTTGAAACACAATGATACATTGGTGGATTTGCAGACAGAAGGATTTCAAACTGCCAGTGGTCACTCAATTGAAATTTCACATGCAGCACTTACCAAAGGTTTACATTGCCTTAAAGGTGCAATGGAAGATGGTGACACTGAACCAGCTAAGATCTCGCCTAAGCTTGATAAGGGAGGAGACTCTTTCACCATTCCGAAAGCATCATGCCTTAGAATAAATTCTAGACAGTTAAAGGATGATGAAATTCTTCAAGAAGAGGAAGAAGTAAAGCAACTTCTGCAGCTTGTGAAAAGTGGAGAAGACTTCGATGTGTGGCATGAAAATGAACAGCCTCTGCCAGACAATCTTGAGGAACCTAAAGCTACTGTTGCAACTGTAAATGCCTCTTTATTCCCAAATCAATCTGTTGATCTGGTCGAGGAGGAACACTTGAAGTCCCTCAAAACATTTGAAGCCAAGAACAGCAGTTTTACATCATTCACAAAGTCCACAAACATAGCAAGTGAAAGCAAAAATGTCATCAGCCACAAGGCTTGCTATCAAAAGGCAGAAGAAATACAATCTTCTGTACACACTGAACATGAAATCCTTCATTCAAAAGAAGAAATAGATAAAGAAATAGTTCCACTGGGTCATGATAACATTTGCTCAAAAATATTGAATCATGGATCCACTAGCCTGAAATGTGAAGAATCATCTGTGTGTTCCGATAGTAATCCTGAAGTGTCAAACGAAATGAAAATATCCAGTGAAGCTTTAAGTTTCCTTACCAACCTCATGGACAATCGCAGCAGAGGGTGTTCCTCTGCACCTACTTGTGAGACATCTGGATCTGATGGGAAGACTATAAATGGTTCTGCAGGAACTTCCACAGAAATCAGACATTCACTGAATGTTTTTGACGGAGGTGCTGCTGCTGCAAGCACCAGTAATGATAAAAAGCATTTTGTGGAGGGGAGAGTGCCAGAGAACTCTTTCACAAGTGCTCCAAAATCTTTCAGTGATGGCAAAGCAGAGACTGAACATTTTTTGGAGAGAGGAGAGGGTAAATTAGCCTTTTCAACGGGAAGTGGTAGAGCAGTAAATGTATCCAGAGAATCTTTAAAGAAAGTGAAAGGTTTATTTGATGATGTGTCATCTGCTAGTGTGAACAAGAAAGGCTCATCTGACATGGACATGGTGACAGAAAACTTTGTAGCTGGTTTTTCAACTGCCAGTGGAAAATTTGTAAGCGTTGGCAAGGAAGCTTTAAGCAAAGCCAAAAAACTTTTTGATGGTGTATCATCTGAAGATGAAAACCTATCTGTTGAACCTGAAACAATTCCTGGCGAAGTATTAAATTCCAAGGAAGATCATATGCCTGGTTTCTGTACAGCCAGTGGGAAGTCAGTCAGTGTCTCTGAAATTGCAGTTGAAAAAGTGAAAGGATTGTTTGATGCAGAGTCACCTCTCTAG 3804 0.4051 MRTVVSPRNLAGTFISPKVSPNIALRHGQGKTGTQHSLSTLHSRSKSVAVKIIKSSLNVMRQLENEANCLGLYHSNIVSTIKVLPPCNEVPGIVIMERVVGYSLEMLLDYDFLRNRKEQRVRYSMHICSALAYCHQHGVLHLDVKPQNILVDLLTDTCKLCDFGCSYKIGTEALPQLPPGTAGYAAPEILQGSKPSTAADVYSLGITMWQLLSGEAPFKDMRAHTVIYKVVASEXTHDDSRNLLNPNAGMREKKTSMSNRRKKIITNQNIPADGVGVCLPLGATLCAMNLLSAIRTCHAVSKCCKESVAIEKVGSSSTMSGQVLSSVSILIAEFIHDYPFHVCCAMLFSKMTETIFLYRENELQTDFIVPKTPVQRAVLQTSQICCESDSEDLFASDTSECGDENFPSNINALLSGPEPSNLSWTSSMATPVAGNVTWSNLNTEERKVFLPNKAEMNNVTPKLLQRRSTTGHKISIDTPLAMHSSPHNMSAFAQQVDEGIEKVTSGSPILSGSGEFKKTPAQYEEIFPEENDLFDNVESIDGIISCNETTKENSAAESTPNPESRSRSPLSMEKEFVESELIELVTSNSSEKASRAQKRGNSAISSTPGKHLDAKRRRLLFSSCDTTINSSKLLFKAPETKLHDEAVLNHVEDIAAELIPDDSFSEHLAAINTSIFSDPIAPLTKVQAIKSSVSHMKKFCYTIDERKSVPDDKKACLPTTPQDLMEEIIKSVLAQETAKAVTVKAKPVLPSGDLIVFSQMVSKEEDQTENQLETTDAPGLSLMLKHNDTLVDLQTEGFQTASGHSIEISHAALTKGLHCLKGAMEDGDTEPAKISPKLDKGGDSFTIPKASCLRINSRQLKDDEILQEEEEVKQLLQLVKSGEDFDVWHENEQPLPDNLEEPKATVATVNASLFPNQSVDLVEEEHLKSLKTFEAKNSSFTSFTKSTNIASESKNVISHKACYQKAEEIQSSVHTEHEILHSKEEIDKEIVPLGHDNICSKILNHGSTSLKCEESSVCSDSNPEVSNEMKISSEALSFLTNLMDNRSRGCSSAPTCETSGSDGKTINGSAGTSTEIRHSLNVFDGGAAAASTSNDKKHFVEGRVPENSFTSAPKSFSDGKAETEHFLERGEGKLAFSTGSGRAVNVSRESLKKVKGLFDDVSSASVNKKGSSDMDMVTENFVAGFSTASGKFVSVGKEALSKAKKLFDGVSSEDENLSVEPETIPGEVLNSKEDHMPGFCTASGKSVSVSEIAVEKVKGLFDAESPL 1267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju1000579g0007 1267 Gene3D Transferase(Phosphotransferase) domain 1 22 272 - -
Alju1000579g0007 1267 ProSiteProfiles BRCA2 repeat profile. 1178 1212 IPR002093 -
Alju1000579g0007 1267 SUPERFAMILY Protein kinase-like (PK-like) 43 228 IPR011009 -
Alju1000579g0007 1267 PANTHER SERINE-THREONINE PROTEIN KINASE 28 243 - -
Alju1000579g0007 1267 MobiDBLite consensus disorder prediction 546 567 - -
Alju1000579g0007 1267 Pfam BRCA2 repeat 1134 1160 IPR002093 -
Alju1000579g0007 1267 Pfam BRCA2 repeat 1238 1262 IPR002093 -
Alju1000579g0007 1267 Pfam BRCA2 repeat 1182 1208 IPR002093 -
Alju1000579g0007 1267 MobiDBLite consensus disorder prediction 587 609 - -
Alju1000579g0007 1267 ProSiteProfiles Protein kinase domain profile. 21 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju1000579g0007 1267 MobiDBLite consensus disorder prediction 546 573 - -
Alju1000579g0007 1267 Pfam Protein kinase domain 28 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju1000579g0007 1267 SMART serkin_6 22 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju1000579g0007 1267 MobiDBLite consensus disorder prediction 587 608 - -
Alju1000579g0007 1267 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Alju1000579g0007 1267 ProSiteProfiles BRCA2 repeat profile. 1129 1163 IPR002093 -
Alju1000579g0007 1267 ProSiteProfiles BRCA2 repeat profile. 1232 1266 IPR002093 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju1000579g0007 22 234 CBL-interacting serine-threonine protein kinases AT2G25090 31.304 1.41e-19 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Cr-3 Alju1000579g0007 Pkinase 9.5e-37 CL0016