Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju1000572g0013 ATGAAGCGAGTTATTCTCTTCAAAAATGGCACAGACACTGACGGAAAGGTGTTTCTTGTCACTCACTCTATGGAAGAACTACTTTCATCTGCAAGTCAGAAATTTAACTTAACTGCCAAGCGTTTGTTTACACCCCAAGGTGGAGAGCTTGATGATCTTAAACTGATCAGGGATGATGACGTACTGTATGTGTCAGCTGGGGAAAGTTTTATTCCCCTAGAATCAAATAAAAAGGTGTCCAATGCTGTAGTTCCAGTTGGAACCTCTGGTTCAGCATCATCATCATCATCATCAAAGGACTGGGTGACGCTAAATGTGGGTGGGAAGTACTTCACCACATCTAGAAGTACTCTTGTGTCCAAGGAACCATTGAGTATGCTTGCAAGAATGTTTGCTGAAGGAGAGAATGGATATTTGATGACACCTAGTAATGTGGATTGCAATGGAGCATTCTTAATTGACAGAAGCCCAACTTACTTTGAACCTATCCTTAACTACTTGAGAAATGGTCAGTTAATATTTGACACAAATGTAAATCCTGAAGCTGAGTTAAGGTTCCAAGGTGTTAATTTGGCTGGTTCTGATCTCTCACGACTGGATTTAAGATACATCAATTTCAAGTATGCCTGCTTACACGGTTGTAGAATGATGGGTGCCAATTTGAGCTGGTGTTGCTTAGAGCGAGCAGACCTGTCTCATGCTCAGCTGGAAGGAGCCCATCTGTTAGGAGTAAAAATGCTCTGTGCCAATCTGGAAGGAGCAAATCTACGTGGCTGCAATTTTGAAGACCCTGCAGGAGTTAATTTAAAAGGAGCCAACTTGGAAGGAAGCAACATGGCAGGTGTCAACCTTAGAGTTGCTACTCTGAAGAATGCAAATTTACAGAATTGTGACTTGAGGGCTGCTGTTCTTGCTGGTGCAGATTTGGAGAACTGTGATTTGTCAGGTAGTGATCTAAATGAAGCCAATCTGAGAGGAGCCAATCTTAAAGGGGCTGCATTTGAGCTCATGGGTACATATGTAAAATTTTACTCCTCTTCTCATAATGTGACTGCAGAAGGTTCTGTGATTCTTATCAATGTCCATACTTCAAGAACTATCACATCTGTGACTGTATGGGGTTCTGATGATTCAGTTGATTGTCATGCAGTGTAA 1155 0.4173 MKRVILFKNGTDTDGKVFLVTHSMEELLSSASQKFNLTAKRLFTPQGGELDDLKLIRDDDVLYVSAGESFIPLESNKKVSNAVVPVGTSGSASSSSSSKDWVTLNVGGKYFTTSRSTLVSKEPLSMLARMFAEGENGYLMTPSNVDCNGAFLIDRSPTYFEPILNYLRNGQLIFDTNVNPEAELRFQGVNLAGSDLSRLDLRYINFKYACLHGCRMMGANLSWCCLERADLSHAQLEGAHLLGVKMLCANLEGANLRGCNFEDPAGVNLKGANLEGSNMAGVNLRVATLKNANLQNCDLRAAVLAGADLENCDLSGSDLNEANLRGANLKGAAFELMGTYVKFYSSSHNVTAEGSVILINVHTSRTITSVTVWGSDDSVDCHAV 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju1000572g0013 384 Gene3D Doublecortin domain 1 83 IPR036572 GO:0035556
Alju1000572g0013 384 SUPERFAMILY Pentapeptide repeat-like 183 334 - -
Alju1000572g0013 384 Gene3D Potassium Channel Kv1.1; Chain A 91 179 IPR011333 -
Alju1000572g0013 384 Gene3D - 264 349 - -
Alju1000572g0013 384 ProSiteProfiles KHA domain profile. 3 82 IPR021789 -
Alju1000572g0013 384 SUPERFAMILY Doublecortin (DC) 2 78 IPR036572 GO:0035556
Alju1000572g0013 384 Gene3D - 180 263 - -
Alju1000572g0013 384 PANTHER UNCHARACTERIZED 107 183 - -
Alju1000572g0013 384 Pfam BTB/POZ domain 102 179 IPR003131 GO:0051260
Alju1000572g0013 384 SUPERFAMILY POZ domain 100 181 IPR011333 -
Alju1000572g0013 384 ProSiteProfiles BTB domain profile. 102 176 IPR000210 GO:0005515
Alju1000572g0013 384 CDD KHA 2 65 - -
Alju1000572g0013 384 ProSiteProfiles Doublecortin domain profile. 21 76 IPR003533 GO:0035556
Alju1000572g0013 384 Pfam KHA, dimerisation domain of potassium ion channel 2 64 IPR021789 -
Alju1000572g0013 384 Pfam Pentapeptide repeats (8 copies) 304 333 IPR001646 -
Alju1000572g0013 384 Pfam Pentapeptide repeats (8 copies) 224 263 IPR001646 -
Alju1000572g0013 384 Pfam Pentapeptide repeats (8 copies) 185 222 IPR001646 -
Alju1000572g0013 384 SMART doub1_11 2 76 IPR003533 GO:0035556
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju1000572g0013 8 65 Ion Channels AT2G25600 44.828 5.04e-07 50.1