Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju1000553g0001 ATGGGAGTTGGAAGCAATAAAGATATCTTGTTTCTGTGGTTACTACTGATAGTGGCTTCTTGTTGTTCATCATGGTCTGTAGAGGAACATCGAATAAAGCAGTTGCCGGGGCAGCCACCAGTGGGCTTCACTCAGTTCTCCGGCTACGTGACGGTGAACCGCCGGCATGGGAGAGCTTTGTTCTACTGGCTCACTCAGGCCACCTCTTCCCCTCACAATAAGCCTCTTGTTCTCTGGCTCAATGGAGGGCCTGGTTGTTCATCTGTAGCATATGGGGCATCAGAAGAAATTGGTCCATTTCTGATAAACAAAACTGGTTCTTCTCTATATCTTAACAAGTATGCATGGAACAGAGAAGCAAATACCCTTTTTCTTGAATCGCCTGCTGGTGTTGGTTTCTCCTACACAAATACAAGCTCTGACCTCAAAACTACTGGGGACAAAAGGACAGCTCAAGATGCACTGATTTTTCTAATTAGATGGATGTCAATGTTTCCACACTATAAATACAGAGAGTTTTACATTGCTGGAGAGAGCTATGCAGGTCATTACATTCCCCAATTGGCTAAGCAAATCTATGATTATAATAAAGCACACCCACATATCATTAATCTAAAAGGGTTCATTGTGGGAAATGCTTTAACTGATGACTACTATGATGGGATTGGAACTATCACATACTGGTGGAGCCATGCTCTGATATCTGATCTCTCCTATCATTCAATCCTCAAATACTGCAACTTCACATCAGAAAAGACTTCCAAAAAATGTGATGATGCAGTGAGCTATGCCGTTAACCATGAATTTGGAAACATCGATGCATACAGTATTTATACGCCGCCATGCCCAACTTGGCATAACGATACCTTAAGGTATATACGGTTCAAGAATACAGTGTTACATAGGATTTCAGGGTATGATCCATGTACAGAACAACGTGCAGAAAAATATTATAACCGACCCGAAGTGCAGCAAGCAATGCATGCAAATGTTACAGGCATACCTTATAAGTGGACTGCTTGCAGTAATGTGCTCCTGAGAAACTGGAAGGATTCTCCAGTTTCTGTATTGCCAATATACAAAGAGTTGATTGCGGCTGGTTTAAGAATATGGGTTTTCAGCGGGGACACAGATTCTGTGGTTCCAGTAACAGCCACTAGGTTTTCCCTTAACCATCTTAACCTCACCATTAAAGCTCGTTGGTATCCATGGTACTCAGGTGGACAGGTAGGCGGATGGACAGAGGTGTATGAAGGGCTCACATTTGCCACAGTGAGAGGAGCTGGGCATGAAGTACCATTATTTCAGCCTAGGCGAGCGTTCACACTCTTCAAATCTTTCTTAGCAGGAAAGGAGCTACCAAAATCTTAG 1371 0.4311 MGVGSNKDILFLWLLLIVASCCSSWSVEEHRIKQLPGQPPVGFTQFSGYVTVNRRHGRALFYWLTQATSSPHNKPLVLWLNGGPGCSSVAYGASEEIGPFLINKTGSSLYLNKYAWNREANTLFLESPAGVGFSYTNTSSDLKTTGDKRTAQDALIFLIRWMSMFPHYKYREFYIAGESYAGHYIPQLAKQIYDYNKAHPHIINLKGFIVGNALTDDYYDGIGTITYWWSHALISDLSYHSILKYCNFTSEKTSKKCDDAVSYAVNHEFGNIDAYSIYTPPCPTWHNDTLRYIRFKNTVLHRISGYDPCTEQRAEKYYNRPEVQQAMHANVTGIPYKWTACSNVLLRNWKDSPVSVLPIYKELIAAGLRIWVFSGDTDSVVPVTATRFSLNHLNLTIKARWYPWYSGGQVGGWTEVYEGLTFATVRGAGHEVPLFQPRRAFTLFKSFLAGKELPKS 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju1000553g0001 456 ProSitePatterns Serine carboxypeptidases, serine active site. 175 182 IPR018202 GO:0004185
Alju1000553g0001 456 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 135 IPR001563 GO:0004185|GO:0006508
Alju1000553g0001 456 PRINTS Carboxypeptidase C serine protease (S10) family signature 420 433 IPR001563 GO:0004185|GO:0006508
Alju1000553g0001 456 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 124 IPR001563 GO:0004185|GO:0006508
Alju1000553g0001 456 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185|GO:0006508
Alju1000553g0001 456 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 31 437 IPR001563 GO:0004185|GO:0006508
Alju1000553g0001 456 SUPERFAMILY alpha/beta-Hydrolases 30 453 IPR029058 -
Alju1000553g0001 456 Gene3D - 356 450 - -
Alju1000553g0001 456 FunFam Carboxypeptidase 356 450 - -
Alju1000553g0001 456 Gene3D - 309 346 - -
Alju1000553g0001 456 Gene3D alpha/beta hydrolase 26 284 IPR029058 -
Alju1000553g0001 456 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Alju1000553g0001 456 FunFam Carboxypeptidase 26 284 - -
Alju1000553g0001 456 Pfam Serine carboxypeptidase 37 449 IPR001563 GO:0004185|GO:0006508
Alju1000553g0001 456 ProSitePatterns Serine carboxypeptidases, histidine active site. 420 437 IPR033124 GO:0004185
Alju1000553g0001 456 FunFam Carboxypeptidase 305 453 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju1000553g0001 314 453 Calmodulin-binding Proteins AT2G22960 29.787 6.50e-15 71.2