Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju1000522g0010 ATGGTGCTGCAAAATAGCGGTCGCTTTAAGGCCGATAAAGGGGACAAAGTTGAGAAGAATTCAGGCAGTGGATCAAGAGAGGATAATTCGGAGAACAGGCTAAAACAAGCTTTAGAAAATGATGCTATTGATAGTAAGTATGGCTTCAAGAGAGTTGCTGATCATCAAGAACGAGCTGGCTTCCTTATCAACATGCATACTGTAAGATCATTTATCTATGATGCCAGAGCAAGAATCCTATTTTCCTTTCTCTTAAAGCCAAATCACTTGATCGGACTGAAGCAGAAGTATATAAAGCTTTCATTTTTCACAATCAAAGACTTAATGGATGTTCGCTCTCCAATACTATCAGCAGTGAAAAAAAACCGAGAACGAGAAAAGGGCAATACCTATTATTCAGAGCTTCTCTCCAAAGCCCTTGCAAGTACCAGCACAGCTGCCACCCATAAAACAAGTGATCAGATGGAAAATATAATTGACATCAGAGAATATGATGTGCCCTACCATATACGGGTGTCTATTGATAACAAAATATTCTGTGGATCATGGTACTCAGTCTGTTCTAGAGGTTCGGATGCCCCTTTCATTACCAAGCGAAATGATATCATTGAGACACCAGACATGATTGTTTTGGCTTATGATATTGAAACGACCAAACTTCCATTGAAATTCCCAGATGCTCAGACAGATCAAATCATGATGATATCATACATGATTGATGGGCAGGGCTTCCTCATCACTAATCGAGAGATCATTTCTGCAGATGTAGAGGATTTTGAGTATACACCCAAGCCAGAGTTTGAAGGATTCTTCACCATTTTCAATGAACCTGATGAGAGATCTTTGTTGCTTCGTTTCTTTGAGCACATTATGGATGTTAAGCCTCACATTTTTGTGACATACAATGGTGACTTTTTCGATTGGCCATTTGTAGAAGCTAGAGCTGCAATACACCACTGGGTTAAGAGAGATTCATATCTACCTGTTGGCTCTCAAAATCTGAAAGCTGTGGCCAAAGCAAAACTTCGGTATGATCCTGTTGAACTCGATCCTGAAGATATGTGTGCTATGGCTGCTGAACAGCCTCAAGTTATGTCTAATTACTCAGTGTCAGATGCTGTTGCTACTTACTATCTGTATATGAAATATGTGCATCCTTTCATATTTGCTCTTTGCACTATCATTCCACTAGAGCCTGATGAGGTGCTTAGAAAAGGATCTGGAACTCTATGTGAGTCTCTTCTCATGGTGGAAGCTTTCCATGCAAACATTATCTTCCCCAATAAACAACAAGAAGAACTCAACAAGTTGAGTGATGATGGGCATGTTCTAGATCAAGAGACCTATGTTGGTGGCCATGTTGAAGCTCTCGAGTCAGGCGTTTTTCGGGCTGATATTCCTTGTCACTTTCGTATTACCCCAAGTGCTTGTGAAAAGCTTTTAAATAATATTGAAGGTGCACTTAGGCATGCAATTGTTGAGGAGGAAAAAATCCCTCTGGATATGGTAACCAATTTTGATGAAGTTGCTGATGACATTAAAGCCAAGTTAGAAGACCTCCGAGATACTCCAATGCGGCTGGAAAATCCTGTTATATACCACTTGGATGTGGGTGCTATGTATCCCAATATTATTCTAACAAACCGACTTCAGCCATCAGCAATGGTTGATGAAGAAACATGTGCAGCATGTGATTTTAACAGGCCAGGAGCAAGATGCCAACGCAAAATGGCATGGATGTGGCGTGGAGAAGTAATGCCTGCAAGCAGAAATGAATTTCACAGAATTCAACAGCAGTTAGAGACTGAAAAATTCCCCCCTCAGTTTCCCGGAGGTCCTAATCGGGCATTTCATCAACTGAGCCGAGAAGAGAAAGCTACTTATGAAAAAAAACGTTTGTCTGAATATTGCCGCAAGGCTTACAAAAAGACTCATATTACTCGAATTGAAGAGAGGTACACCACTATTTGCCAAAAGGAAAACTCATTCTATGTTGATACTGTAAGAGCATTTCGAGATCGTAGGTATGAATATAAGGGTCTTTCAAAAGTAGCCAAGAAGCAAGTGGCAGATGCTGTGGCAAGTGGAGATGCAGGAGAGATAAATCTGCCAAGAACAGAGAAGTTTTGTGCAAATATAATTACCAAAGCAAGAGAGATCATTGAACAAGTTGGGCGCCCTCTTGAGCTGGATACAGATGGTATATGGTGTATCTTACCAGCGTCATTTCCAGAGAACTATGTTATCAAGAGCACTTTTCCTAAAAAGTCAAAGGTTACCATATCGTACCCCAATGCAATTCTCAACTACATGGTGAAGGATCATTTCACAAATGATCAGTACCATGACCTTGTTAACGCAGAGACACTAGAATACAACATACACAGTGAAAATTCTGTGTTTTTGAAGTTGATGGACCTTATAAAGCTATGCAAAAAGCCTGAAGGTTCTCCTGTGACTGATCGAGCAATACCTCTTGCAATTTTTCAATCCGAGCCGAGTGTCAAAAGACATTTCCTCAGAAAATGGCTCAAAGACACATCCATTTCTGATATTGATATTCGACAGGTAGTGGACATGGAGGATATTGGAAATACAGAAATCAGTCCGGCTGGAGGAAGGCCTGTATGCCACAAGAGGAAAAGACCAATCTCTTCTGAGGATAGGCAAGCATGGATCCAATACCAGAAAAGGAAGTGGGCTCTACAAGCTGAAGTTCGTGCAGCAAGGAGGAGTTCAGTTGAAAAACGAGCTCGTATTGATGATGGTGATGGTGCTCCTGTAGCTCGTCCTATGCTAGGGACGTGGCTCAGCTGCTACTTTGGGTGGTTTCTTGAGGAGAACCCAGAGAACACTCCTGGACACACCATGGCAAATCATCCAGTTCTGAAGCTTTGGGCTTTGGTTGGACATGACCTTCACCAGCTTAAGCTGCAAGTTCCTCGGATATTCTACGTGAATCAGCGACTTGCAAGACCAGAGCCTGAAAATAATGTCACAACACTATGGAAAAAATGCAACAGGATATTACCTAGATCAAGGCCAGTTTTTCATCTGTATGAGTACTCTGTTCCTGAAGAACTCTTTCGTGAGCATAGCCAGGAGCTAATGGCGGATTTATCCACACCAGATATTGAAGGAATCTATGAGACGCAAATGTCACTTGAATTCCGTGCCTTAGTTAGACTGGGATGTGTCCGCACAAATCAAATGCCAAATATGAGCTCCCTGTACAATGCTGAGCGCAATGCTAAAATAAGCAGAGGCCATGACGAGGCCACCTTGCCTCAAAAAGAGTTTAATTTTGAAATTCGTGTTGAAACTGATGTCAAGCAGGTATACAGGCTTCTTCAAAATGCTCTCCAGGCATACAGAGATGAGAAGAAAGGTCCATCCCTTCTTGCCATTCAGTCGCTTCATGATTTGCCCACCATCAATTCTTTAATGCCAGGATTGGGGGAATTTCCTCAGATGGCTATCTATGGGCTTGGAGAGGCAGAAAATCTCTATTCAACACTTGATTGGCAAAGAGTGGGAGCCAAAGCTATTGTTCGTCACTACCTAAGTAGTGAGAAAGTTTTAGCAATCAGCACAGAGCAGTGTAGATATTTCCATTTACCGTTAGGAAATTTACCTGCTGATGCTACTCTTTTTGGTGCTGATTTATTTTATGCGAGACACTTAACAAAGCAAAATTTCGTCCTCTGGTGTTCCAACACTGATAGACCAGATCTTGGTGGTAGAGAGGTTGATGATAACAGGTTATTAACAGAATTTGAAGAAAGCTCAAGTGTTATCACAAATGCACCTAATGCTTATTCAATGATTTGTGTGGATTTGGAAATTGATAGCCTTGCTGTCAACACTCTTCTACAGTCCCATCATGTTCATGATATAGAGGGGACCAGTGCTGGTGTAGCATTTGATGTCATGCCTCAGGCATCACTGGAGGATATGATTTCAGGTCAAACTGCAATATTGCCCAGCTATGATGAGACAGCTTCATGCAGTGCTGCCTTCAAAGTTCTACGATCAATGGTGAACGCATGGTTAAGAGATGTCACTTTGTACAGAAATGAGTTTGCTGATCTCCAGATTGTGCATTTTTATCGTTGGATAAGATCTTCAAATGCATTGCTATATGATCCAGCTCTGAGACGCACTTTGCACAATCTAATGAAGAAACTTTTCATGCAACTGGTAGCAGAATTTAAACGACTGGGGTCTATAATAATATATGCCAACTTCAACAAAGTTATGCTATGCACCAAAAAGAAGAATGTGAAGGATGCTTTGAGTTACGTTGAGTATATTGTGACAAGCATCCACAACAAAGAACTTTTCCATAGCATTCAAATCACTTACCAACAGTGCTGGGAGTACTTGTTGTGGCTTGATCCATCAAATCATGCTGGTGTCAGAGGAAAGCTACCAACAGACAATGATGATGTTTTTCAAGGCAATCAGCATGACGATGAGGACCAAAGCAAAGATGATACTCCAGAAATAGTTATGAACTGGAATTTGATGGAATACCTTCCTGAAGATGCTGCCTGTCAGGATAATTTCTCTGCCATAATTGCTGGTTACATCATGAAGATTTTTTTGCACCTTCAAGAGAATATGATTCCGGAAGGTCAAACTCCAATTCGCAGAAAGCGTGCTGGCTCTCAAAGCCAGACTCAGAGTAAACCCATGGGTGTTGGTGTGCATCTCACTACTGCTGAATATGCAAAAGAGTTGATTTCTGGTGAAATGGCCCAGAAATTATTTTAGCCTGTTTGGAAGTGCCCAATGTGTAATAACAGTTATGACAACACAGATATCGAGCACATGCTCATAGATACAATAAGTCGTAAAGCAATGGCTAGTATTCTTCAAGACCTACAATGTCGAAAATGTCTTCAGATAAAAATGGAGAATATGCCTGAGTATTGCAGTTGTGCCGGTGAATTCAATACTCTCATCTCAAAATCAGATTTAGGCATCCACCTTAAGACTTTCAGAAGCATAGCTGACCACTTTAATATGCCCCTTCTCCTGGAATCTGTTAATTGGATGTTTGAAATGAATCCTTCTCTTTCCACTATTTAA 5094 0.4111 MVLQNSGRFKADKGDKVEKNSGSGSREDNSENRLKQALENDAIDSKYGFKRVADHQERAGFLINMHTVRSFIYDARARILFSFLLKPNHLIGLKQKYIKLSFFTIKDLMDVRSPILSAVKKNREREKGNTYYSELLSKALASTSTAATHKTSDQMENIIDIREYDVPYHIRVSIDNKIFCGSWYSVCSRGSDAPFITKRNDIIETPDMIVLAYDIETTKLPLKFPDAQTDQIMMISYMIDGQGFLITNREIISADVEDFEYTPKPEFEGFFTIFNEPDERSLLLRFFEHIMDVKPHIFVTYNGDFFDWPFVEARAAIHHWVKRDSYLPVGSQNLKAVAKAKLRYDPVELDPEDMCAMAAEQPQVMSNYSVSDAVATYYLYMKYVHPFIFALCTIIPLEPDEVLRKGSGTLCESLLMVEAFHANIIFPNKQQEELNKLSDDGHVLDQETYVGGHVEALESGVFRADIPCHFRITPSACEKLLNNIEGALRHAIVEEEKIPLDMVTNFDEVADDIKAKLEDLRDTPMRLENPVIYHLDVGAMYPNIILTNRLQPSAMVDEETCAACDFNRPGARCQRKMAWMWRGEVMPASRNEFHRIQQQLETEKFPPQFPGGPNRAFHQLSREEKATYEKKRLSEYCRKAYKKTHITRIEERYTTICQKENSFYVDTVRAFRDRRYEYKGLSKVAKKQVADAVASGDAGEINLPRTEKFCANIITKAREIIEQVGRPLELDTDGIWCILPASFPENYVIKSTFPKKSKVTISYPNAILNYMVKDHFTNDQYHDLVNAETLEYNIHSENSVFLKLMDLIKLCKKPEGSPVTDRAIPLAIFQSEPSVKRHFLRKWLKDTSISDIDIRQVVDMEDIGNTEISPAGGRPVCHKRKRPISSEDRQAWIQYQKRKWALQAEVRAARRSSVEKRARIDDGDGAPVARPMLGTWLSCYFGWFLEENPENTPGHTMANHPVLKLWALVGHDLHQLKLQVPRIFYVNQRLARPEPENNVTTLWKKCNRILPRSRPVFHLYEYSVPEELFREHSQELMADLSTPDIEGIYETQMSLEFRALVRLGCVRTNQMPNMSSLYNAERNAKISRGHDEATLPQKEFNFEIRVETDVKQVYRLLQNALQAYRDEKKGPSLLAIQSLHDLPTINSLMPGLGEFPQMAIYGLGEAENLYSTLDWQRVGAKAIVRHYLSSEKVLAISTEQCRYFHLPLGNLPADATLFGADLFYARHLTKQNFVLWCSNTDRPDLGGREVDDNRLLTEFEESSSVITNAPNAYSMICVDLEIDSLAVNTLLQSHHVHDIEGTSAGVAFDVMPQASLEDMISGQTAILPSYDETASCSAAFKVLRSMVNAWLRDVTLYRNEFADLQIVHFYRWIRSSNALLYDPALRRTLHNLMKKLFMQLVAEFKRLGSIIIYANFNKVMLCTKKKNVKDALSYVEYIVTSIHNKELFHSIQITYQQCWEYLLWLDPSNHAGVRGKLPTDNDDVFQGNQHDDEDQSKDDTPEIVMNWNLMEYLPEDAACQDNFSAIIAGYIMKIFLHLQENMIPEGQTPIRRKRAGSQSQTQSKPMGVGVHLTTAEYAKELISGEMAQKLFXPVWKCPMCNNSYDNTDIEHMLIDTISRKAMASILQDLQCRKCLQIKMENMPEYCSCAGEFNTLISKSDLGIHLKTFRSIADHFNMPLLLESVNWMFEMNPSLSTI 1697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju1000522g0010 1697 MobiDBLite consensus disorder prediction 1485 1499 - -
Alju1000522g0010 1697 FunFam DNA polymerase epsilon catalytic subunit 311 405 - -
Alju1000522g0010 1697 CDD DNA_polB_epsilon_exo 207 381 - -
Alju1000522g0010 1697 MobiDBLite consensus disorder prediction 9 35 - -
Alju1000522g0010 1697 MobiDBLite consensus disorder prediction 1475 1499 - -
Alju1000522g0010 1697 Pfam DNA polymerase family B, exonuclease domain 86 317 IPR006133 -
Alju1000522g0010 1697 SMART DUF1744_2 1073 1473 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Alju1000522g0010 1697 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 882 1066 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
Alju1000522g0010 1697 SMART polmehr3 206 741 IPR006172 GO:0000166|GO:0003676|GO:0003887
Alju1000522g0010 1697 Pfam Domain of unknown function (DUF1744) 1074 1473 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Alju1000522g0010 1697 Gene3D DNA Polymerase, chain B, domain 1 73 190 - -
Alju1000522g0010 1697 SUPERFAMILY DNA/RNA polymerases 406 741 IPR043502 -
Alju1000522g0010 1697 Gene3D - 319 447 IPR036397 GO:0003676
Alju1000522g0010 1697 Gene3D - 207 318 IPR036397 GO:0003676
Alju1000522g0010 1697 MobiDBLite consensus disorder prediction 1 35 - -
Alju1000522g0010 1697 SUPERFAMILY Ribonuclease H-like 92 427 IPR012337 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju1000522g0010 813 859 Core DNA Replication Machinery Family AT1G08260 46.809 6.71e-07 52.8