Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju1000516g0008 ATGGTCGCCCCGTGGGCTATGCCTCCGCCAACGTCGGCTGCCACCGTCAGCGTGCAGTGTAGTTATATCTTGAGGGAGTTCGCAGCGTCTCCCTCTGCCCGCAAGCTGGAGCGCCTAGCAGGGGCACGGTTTTCCTCCAAGTCGGCACCTTGGCGCGCCTCGCTCCCGCGGGACACAGCCATCACACATGCTCCAGCGCTCCAGCTTGGCTTTAGCCCTCTAGCCGTGAGTCTAAGCGGGTCTCTTTCCCTCCTCGCCGCTGCCTGGGATCGTTGTGGTGCGCCGGCTGCTCTTCCGTTGGTTGCAAAAGGACCGGGCTTGCTGCAGCCAGTGCAGCCAGTGCAGCCGCGCTGCAGGCGAGGGCACGCACGCAGCAGCGGCCCTCTTGCGCCCTTCCCTTCCCTTGGTCCTCTCTTTACCCACCTTCGTCTCGTCTTCCTCCTCCTCTATCGGCTTGCTTTCCGCGTCGTTTCGCCCGTCTCACCGCGTCGCCGCGTGTGGCGGGAGTGGCGGGGAGTAGTGGCACGGCGTGGTGTGGGGAGAGGTGAGTCATCGTCGCAGCCCGCTGGCCCGCAGCCCCGCAGCGTGCCCCCGCTCCGCTCTGCTCCGCTCCCTGCCTGCCTGCCTGCCCCTCCATCCTGCAGCCTGCCGCAGGCCTGCCACCTCTCCACCTCGCCGAGCACCTTTTTCGGCTTTCAACTCCGCTGGCTCCTCGTCCTCGCTAGAGTCCTAGCCACGTCCCGTAGACTTCGGCCGCAGCTGCAACTTTGTGGAGGCCTCCGGGACTCCAGCTGGGCGCCGGGCTCCAGGCTCGGGCTCAACTCGCGATGGATACGATTCTCTCATCTCCCGCCTTGGAATGAGTTTGACCTGCGCCAAAAGAGCTCAAACTGTTCTGACTTATGCCGAGGCTGGCGTGCCGCTTTTTTTCAAAAGCTGGTCAGTCTCGCTGGCCTTGCCCGGGCCGAGACCTTCGTCGGGATGAGTCACCTCCTGCTTGTTGCTCACGGTGGGCCTGGCGTAGCGTTGCGACGTCTTCACGTCGCGGAGCGACGAGCCTCTCAACAAGTTGGGCCGCGAGCGGCCGCGAGGCACTAGGAGGCCCGGTCCAACGGCGGCGTGGTGCTGCTGCACTGTCAGGCCGGCGTGTCGCGGTCCGCCGCGGTGGCCATCGCCTACCTGATGCGGTCGCGAGGCCTGTCCATGGCCGAAGCCTACCAGCAAGTCAAAGCAGCGCGGCCCATCATTTTCCCCGAATCTCAACTTCATGGGGCAGCTTCTGGAGCTGGAGCAAACTCTGGCCCAGAGCCCCAGCTCCAGCAGTTCGAGCAGCTCGAGTCCCGGGCCGCTGTCGCCGCTGCCCTGCAGCCTGGACAGCGACAGTGTGGGCAGCTCTGA 1398 0.6552 MVAPWAMPPPTSAATVSVQCSYILREFAASPSARKLERLAGARFSSKSAPWRASLPRDTAITHAPALQLGFSPLAVSLSGSLSLLAAAWDRCGAPAALPLVAKGPGLLQPVQPVQPRCRRGHARSSGPLAPFPSLGPLFTHLRLVFLLLYRLAFRVVSPVSPRRRVWREWRGVVARRGVGRGESSSQPAGPQPRSVPPLRSAPLPACLPAPPSCSLPQACHLSTSPSTFFGFQLRWLLVLARVLATSRRLRPQLQLCGGLRDSSWAPGSRLGLNSRWIRFSHLPPWNEFDLRQKSSNCSDLCRGWRAAFFQKLVSLAGLARAETFVGMSHLLLVAHGGPGVALRRLHVAERRASQQVGPRAAARHXEARSNGGVVLLHCQAGVSRSAAVAIAYLMRSRGLSMAEAYQQVKAARPIIFPESQLHGAASGAGANSGPEPQLQQFEQLESRAAVAAALQPGQRQCGQL 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju1000516g0008 465 ProSitePatterns Tyrosine specific protein phosphatases active site. 377 387 IPR016130 GO:0016311|GO:0016791
Alju1000516g0008 465 MobiDBLite consensus disorder prediction 179 204 - -
Alju1000516g0008 465 Gene3D Protein tyrosine phosphatase superfamily 338 427 IPR029021 -
Alju1000516g0008 465 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 364 421 IPR029021 -
Alju1000516g0008 465 SMART dsp_5 310 445 IPR020422 GO:0006470|GO:0008138
Alju1000516g0008 465 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 367 424 IPR000387 GO:0016311|GO:0016791
Alju1000516g0008 465 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 367 420 - -
Alju1000516g0008 465 CDD DSP 370 418 - -
Alju1000516g0008 465 Pfam Dual specificity phosphatase, catalytic domain 367 421 IPR000340 GO:0008138|GO:0016311
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju1000516g0008 367 444 Protein tyrosine phosphatase (PTP) family AT3G06110 35.897 4.14e-08 51.2