Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju1000516g0001 ATGCAGGAATCGCATATCGCACTGCTTAGTTTGGCGGCTGAGTTTGACGTACGAGGACGACCGGACGCTGAGTTATACTGTGGGCCAGCGCAGTACGGCGAGTCCGCCACCGAGCCCCCGGCCGCCGTGTCGCCGCCGCCCCCTAAGCTCCAGATGGCAGGCGACCCGCGCGGGCTACGCAGGCCGGCCGCCCTGGAGCCTCGGCCGCTGCCGACCCTCAAGCTGGAGCCCCACCCGCGAGACCGCGAACCGGACGAGGCGCTGCTGCAGCAGGCACTCCGCCACGCCCAGGAACACCTCAACGAGCCCGCGGACGAGGGCCAGCGCCGAGCCGCCCGCGACGAGCTGCGGGCCTGGCTGGCCGGCCAGCCGCACCTCAACGCCCGCACTGGTACGTCGGGTGCAACACCCACTTGTGCGCTGTGCGTGTCGCGCGAGTGTCGACTTTCATGCGGCAAAGCTCTGGAAATGACAGTGGATCGCTTATCTAGTGCTGGAACTGGTCGGTCTGTCTTTTTACCTCTACGCACAAAAGATGAAGAAGGACGTTGTGTTGTGTTAATTCGAGCAACAGTTCATGACCCCTACAAACACAAACAATCTGATGTCTTTAAGATAGGAAAGATGCTGGTTGATCTGTTACTGGAAAGTGATGAAATTATTTCCATTTATGGAGTCCTAGCTGTAGTGGATTTATGTGGGGTAACTCTTGGACACGCTCTTCAGCTTACACCACCAGTCATTAAGAAGGCTGTACATGCCTGGCAGGACTGCTATCCAGTGAGAACAAGGAGCATGGACTTCATTAATGCTCCTGTATATGTTAATGTAATCCTCAATATCTTCAGAAAATTTATGAACGATAAACTTAAGAATAGAGTTCATGTCCATGGTAGATCTATAAACTCGCTTCATAGAGTTGTTTCCCCATCAATTCTTCCAGAGGAATATGGTGGCACATGTGGGAGTTTACAGGAACTAAAAGATACAAGTCGAATGTACAGCTCACCACCTGCAGTCAGTTTTCACTTCGGTAACTTCTCTGCACTTCACAGTTCTGGTGTTTTGGTACAACAAAACAAACAATCCACCATCCACCACCCCCCCGTTCGGAGCCAAGCAGCTTCTGCTTCTGCTTCTGCTGTCTTTTTGTGTTCTGTGTTGGTTCGAAAGCCTGCGCGAGGCTTTTTTGCCTGTAGTGCCGCTGCTATTACAGATCCAGATTGCAGTTGCTATTGCAGGACTCCGTCCATCTCAACAAACAAGTGTCATATGTTGACATCCTTTGAAGAGTCTGAATACGTGATTATATCGTTTAAAAACTTTATTGGACATCTTGTGAACTTCCTAATTATTTTCAAAATGGAAACAAAGGACAAAAATTCTCGGCCACCTCAGGATTTAGACTGGGAACGTTTTGGATTAGATGGAGGTCGTGGCACAACTCGCAGACATAGCACCAGCCGTGATGAGAGTAGGGGAGGATTTGAAACTGAGTATCATTATGGACATCAACCTTCTGATGCATCTGAAATTTTTGCTCAAGAACATGCAGGGCAACCATGGTGGAAATCCAACTTCTTTATATCACAGCCTGTTCTCTTTGGAACATGGGATGGAGTCTTCACATCTTGTTTAATCAATATTTTTGGGGTGATTGTATTTTTAAGATCAGGTTGGATCGTTGGCCAGGCTGGAATTATTAATGCTGTATTTATAGTAGTTGCTACAGTCTCTGTGGTTCTTACGTCTGTGATGTCTGCTGTTGGAATATGTGAGCGATGTCGAATGGAAAGTGGTGGAGTGTACTTCCTTCTTGCTCATGTTTTAGGCTCTCGCTTTGGAGGTGCCATTGGTCTTCTCTATGTTTTTGGGCAGGCTGTTGGTTGCGCCCTCTATGTCTTGGGGTTCGGCGAGTCCCTAGCTGGACTTCTGGGCCTGGAGAAATCACCATGGTCGGAGCGGGGCTTAGCTGGAGCAGCAGTGATCCTGCTTGGAGCAATAAATGTAGCTGGTGTGAAGTGGGTTGTGAAACTTCAATTTGTGCTCCTCCTTGTTCTTCTTCTTGCTGGCTTAGACTTTGCTGTAGGAAGCTTTGTTCATACTGACCGACAGGAAGGATTTGAAGGATGGATGTCTGGTAACTTGGCAAATAACACATTTGCTGATTACTTTGATGGGTACAGCTGGTTCACAGTTTTTGGAGTATTTTTTCCTACTGTGACGGGTATAATGGCCGGCATTAACATGAGTGGAGATTTAAGACAGCCAAATATCAACATTCCAAACGGCACCATTGCTGCAGTTGGAGTCGGGACATTTTTGTATCTCATGTTTGTGCTGGTGCTGGCATCAACTTGTACAAGGGTCGTATTACAGAAAGACTTTATGATTGCTGCCAAGCGTGGTCCGAATAAAGTGCCAATTTACTCAATGACTGTGGTTGCTATGGTAACCATAACATTCATCATTATCGGTCAAATCAATACACTTGGGCCTGTTGTGACAATGCCATTTCTACTTACCTATGCAGCTGTGGACTACTCATACTTTGCACTGGCCCAAACCTTTGATATGCGTCAGAAACGTGAAGAAAGATATAAGTACAATGAACAGAGTCCAACTTTTGAGGCTAGGGAAGGTTATGGGGCAGCAGGGCATGACTCCCATCATGATGGACATTTCCACAATGACTTGGATAGATTGTTTCCAGAAAGATTACATCACAAGAAAGGGACTGGCAGTCATTCATCCGACCATTCCAGTGTTGTCTCATCACCTGAAGATACTGTTAGTGTAACAGGAAGTGCTGTCACTGCTGTAGAAGTAGGAGCCAACCTGGCAAATGACAGTAAACAAACCAACATTCACTCTAAGCCTCATAACTGGTACTCAAGTCTCTGCAATCGTTGGGCATCTCTCATTGGGGCTGTACTGAAAATTGGCATGATGTTTCTTGTGCACTGGGGCTATGCTCTAATCAACTTAGGTGTCCTATTCCTGGTCTGGTTTTACATTGGGCAAGCAAATCCAGCTGTCAAGCCAGGCGTTTCAGCTGAGTTTAATTTCTTCAGGTGGCTGAAGCAGGCAATTCTGAGAGCCATGGGGAAGCGTATTCATGATTTTGAGCATGTAGTGGTGACGCCAGTCTGCCCAGGTGTTGAAGTTCTTCCTGCTCAGCTCAATGAGGATAATGAGGACTTTGCTTCACGGCGACGTTACCATCAGTCCTCTACTGTTCAGGGCAAATTTGTCGATGTTGATGATGATTAG 3273 0.4757 MQESHIALLSLAAEFDVRGRPDAELYCGPAQYGESATEPPAAVSPPPPKLQMAGDPRGLRRPAALEPRPLPTLKLEPHPRDREPDEALLQQALRHAQEHLNEPADEGQRRAARDELRAWLAGQPHLNARTGTSGATPTCALCVSRECRLSCGKALEMTVDRLSSAGTGRSVFLPLRTKDEEGRCVVLIRATVHDPYKHKQSDVFKIGKMLVDLLLESDEIISIYGVLAVVDLCGVTLGHALQLTPPVIKKAVHAWQDCYPVRTRSMDFINAPVYVNVILNIFRKFMNDKLKNRVHVHGRSINSLHRVVSPSILPEEYGGTCGSLQELKDTSRMYSSPPAVSFHFGNFSALHSSGVLVQQNKQSTIHHPPVRSQAASASASAVFLCSVLVRKPARGFFACSAAAITDPDCSCYCRTPSISTNKCHMLTSFEESEYVIISFKNFIGHLVNFLIIFKMETKDKNSRPPQDLDWERFGLDGGRGTTRRHSTSRDESRGGFETEYHYGHQPSDASEIFAQEHAGQPWWKSNFFISQPVLFGTWDGVFTSCLINIFGVIVFLRSGWIVGQAGIINAVFIVVATVSVVLTSVMSAVGICERCRMESGGVYFLLAHVLGSRFGGAIGLLYVFGQAVGCALYVLGFGESLAGLLGLEKSPWSERGLAGAAVILLGAINVAGVKWVVKLQFVLLLVLLLAGLDFAVGSFVHTDRQEGFEGWMSGNLANNTFADYFDGYSWFTVFGVFFPTVTGIMAGINMSGDLRQPNINIPNGTIAAVGVGTFLYLMFVLVLASTCTRVVLQKDFMIAAKRGPNKVPIYSMTVVAMVTITFIIIGQINTLGPVVTMPFLLTYAAVDYSYFALAQTFDMRQKREERYKYNEQSPTFEAREGYGAAGHDSHHDGHFHNDLDRLFPERLHHKKGTGSHSSDHSSVVSSPEDTVSVTGSAVTAVEVGANLANDSKQTNIHSKPHNWYSSLCNRWASLIGAVLKIGMMFLVHWGYALINLGVLFLVWFYIGQANPAVKPGVSAEFNFFRWLKQAILRAMGKRIHDFEHVVVTPVCPGVEVLPAQLNEDNEDFASRRRYHQSSTVQGKFVDVDDD 1090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju1000516g0001 1090 SMART sec14_4 164 322 IPR001251 -
Alju1000516g0001 1090 PRINTS Cellular retinaldehyde-binding protein signature 246 267 - -
Alju1000516g0001 1090 PRINTS Cellular retinaldehyde-binding protein signature 279 298 - -
Alju1000516g0001 1090 PRINTS Cellular retinaldehyde-binding protein signature 311 320 - -
Alju1000516g0001 1090 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 800 1036 IPR004842 GO:0006811|GO:0015377|GO:0016020
Alju1000516g0001 1090 Pfam CRAL/TRIO domain 174 319 IPR001251 -
Alju1000516g0001 1090 Gene3D Amino acid/polyamine transporter I 535 802 - -
Alju1000516g0001 1090 MobiDBLite consensus disorder prediction 909 930 - -
Alju1000516g0001 1090 Pfam Amino acid permease 541 789 IPR004841 GO:0016020|GO:0055085
Alju1000516g0001 1090 Gene3D - 171 313 IPR036865 -
Alju1000516g0001 1090 MobiDBLite consensus disorder prediction 24 83 - -
Alju1000516g0001 1090 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 172 325 IPR001251 -
Alju1000516g0001 1090 CDD SEC14 179 320 IPR001251 -
Alju1000516g0001 1090 SUPERFAMILY CRAL/TRIO domain 171 329 IPR036865 -
Alju1000516g0001 1090 Gene3D - 314 329 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju1000516g0001 536 876 Inorganic Solute Cotransporters AT1G30450 29.647 8.01e-27 116