Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Alju1000438g0014 | ATGCAAACGCTGGGCTCGGCAGAGGCACAACAAGAAGAAGCAAACCAAACATTTCTGACGGCTCTGATGAGCACTGAACCTCAGCCATCAGTTATCCAGTGGAATAAAGTTCATATTGATCCGAGTAGAGTAACTTGCTCAAGCAATGTTGAGGATACTATGAGAGATCCCAAGGAAGAAAGTGAAAGGACGATCGTGATTCCATTTAATAAGAATACAAAATTCAGTTCTCAGGATCCTGAGTATCTCGATGTCAAGATTGAAGTGCTCTCTGATAGCAAATCTGGCTTTGACGATACTGATGCTGATCCCAACACTGAATATCTTAATGTCAGAATTGAGGTGGAGCCAAACCCAAGCATTGAGTCTTCAAGTTTATCAAGGTATCAAAATAATAAACGATTCCACATATCAGATACAAAACTCCTCTCAACAGATATATTATCTTCTCCTGGCAATACACCTTTTGAAAGGACAGATCCCTCACCTACTATTATCAGCAAGCCATTTAAATGTGATTCATGCAGCAAGTCTTTTGCTACCAAACAGCACTTGGAAAGACATTCCAATCTGCATACGAAAGAAACTCTGTATCCATGCCCGGAATGTGACAAAGTTCTTCTTGACAAGTCTTACCTTCTGCGTCACATGAGAGTTCATGCCGAATTAAAGCCATTCACATGCAACATCTGTCAGAAGAAGTTCCGCACTGCCTGTAGTCTCAAGAGACATGAAACTACTCATGATCCAAGTTCGAGGCCATATGTCTGCCCTGACTGCGATAAACGTTTTCCAGACCGGAGCAGCTTGAAGAAGCATTCTCGGATACATGCTGGTGTTAAGACTCATCATGCTTCAACTTTGACAAGACATATTTTGTCATGTCATCCTGAGGCAGCAAGAGTGAAGAAGAAAAGGTCAAGGCATGCTGACTCTCAAGCATCAGGAAATTTACCTTCTGAGTCTATCAGTCATGAAAATGGAGTCAGTGTTCATGCATCAGCTAATGTAGAACTAAACTCCTCTGAAAATGAACTACCACCTCAAGCAAAAATAGTACCTTCCTTGAATAGCTCTAACTATGTTAGCAATATTGACAAAGGAATTGCTATTGGTCTAGACCGGTGTGCAGGAAATGTTCATGATGCTGCCTCTGTGGACTTAACCAGTAACCCACCCAATGCATTGAGCCCATCTTCATTTGAAATTTATCAATTTGATGCCCATGGAACTTTAGTTAAAATGACCGACACTTTGTCCTTTTAA | 1266 | 0.4115 | MQTLGSAEAQQEEANQTFLTALMSTEPQPSVIQWNKVHIDPSRVTCSSNVEDTMRDPKEESERTIVIPFNKNTKFSSQDPEYLDVKIEVLSDSKSGFDDTDADPNTEYLNVRIEVEPNPSIESSSLSRYQNNKRFHISDTKLLSTDILSSPGNTPFERTDPSPTIISKPFKCDSCSKSFATKQHLERHSNLHTKETLYPCPECDKVLLDKSYLLRHMRVHAELKPFTCNICQKKFRTACSLKRHETTHDPSSRPYVCPDCDKRFPDRSSLKKHSRIHAGVKTHHASTLTRHILSCHPEAARVKKKRSRHADSQASGNLPSESISHENGVSVHASANVELNSSENELPPQAKIVPSLNSSNYVSNIDKGIAIGLDRCAGNVHDAASVDLTSNPPNALSPSSFEIYQFDAHGTLVKMTDTLSF | 421 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Alju1000438g0014 | 421 | Gene3D | Classic Zinc Finger | 168 | 193 | - | - | |
| Alju1000438g0014 | 421 | Gene3D | Classic Zinc Finger | 253 | 287 | - | - | |
| Alju1000438g0014 | 421 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 198 | 225 | IPR013087 | - | |
| Alju1000438g0014 | 421 | SUPERFAMILY | beta-beta-alpha zinc fingers | 252 | 287 | IPR036236 | - | |
| Alju1000438g0014 | 421 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 170 | 197 | IPR013087 | - | |
| Alju1000438g0014 | 421 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 200 | 220 | IPR013087 | - | |
| Alju1000438g0014 | 421 | SUPERFAMILY | beta-beta-alpha zinc fingers | 168 | 220 | IPR036236 | - | |
| Alju1000438g0014 | 421 | SMART | c2h2final6 | 226 | 248 | IPR013087 | - | |
| Alju1000438g0014 | 421 | SMART | c2h2final6 | 170 | 192 | IPR013087 | - | |
| Alju1000438g0014 | 421 | SMART | c2h2final6 | 255 | 277 | IPR013087 | - | |
| Alju1000438g0014 | 421 | SMART | c2h2final6 | 198 | 220 | IPR013087 | - | |
| Alju1000438g0014 | 421 | SUPERFAMILY | beta-beta-alpha zinc fingers | 210 | 262 | IPR036236 | - | |
| Alju1000438g0014 | 421 | MobiDBLite | consensus disorder prediction | 299 | 324 | - | - | |
| Alju1000438g0014 | 421 | FunFam | Zinc finger protein | 194 | 221 | - | - | |
| Alju1000438g0014 | 421 | Pfam | Zinc finger, C2H2 type | 255 | 277 | IPR013087 | - | |
| Alju1000438g0014 | 421 | Pfam | Zinc finger, C2H2 type | 198 | 220 | IPR013087 | - | |
| Alju1000438g0014 | 421 | Pfam | Zinc finger, C2H2 type | 170 | 192 | IPR013087 | - | |
| Alju1000438g0014 | 421 | Pfam | Zinc finger, C2H2 type | 226 | 248 | IPR013087 | - | |
| Alju1000438g0014 | 421 | Gene3D | Classic Zinc Finger | 221 | 249 | - | - | |
| Alju1000438g0014 | 421 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 257 | 277 | IPR013087 | - | |
| Alju1000438g0014 | 421 | FunFam | Zinc finger protein | 223 | 249 | - | - | |
| Alju1000438g0014 | 421 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 172 | 192 | IPR013087 | - | |
| Alju1000438g0014 | 421 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 228 | 248 | IPR013087 | - | |
| Alju1000438g0014 | 421 | PANTHER | ZINC FINGER PROTEIN | 124 | 291 | - | - | |
| Alju1000438g0014 | 421 | FunFam | Paternally-expressed gene 3 protein | 167 | 193 | - | - | |
| Alju1000438g0014 | 421 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 255 | 282 | IPR013087 | - | |
| Alju1000438g0014 | 421 | Gene3D | Classic Zinc Finger | 194 | 220 | - | - | |
| Alju1000438g0014 | 421 | FunFam | ZFP90 zinc finger protein | 253 | 279 | - | - | |
| Alju1000438g0014 | 421 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 226 | 253 | IPR013087 | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Alju1000438g0014 | 170 | 285 | C2H2 Transcription Factor Family | AT3G48430 | 31.967 | 1.04e-10 | 62.0 |
Transcription factors information