Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju1000315g0004 ATGGCGGTTCGGTTACGTGTTATTCCTAATATTGACTCAGAGGGGGTAAGCTGTTTCGCAAGGCCAGGTGCGAACGCTCGCCCACAGGCCTGCGAGCAGCAGCAGGTGGAGCAGGCGCCAGAGTGGGGAGATAATTGGCACTCGCAGAGCTTTACCTACCGCGGGCACTTAACACAGTTGTCCAAGATTGATGACACAGGGCCTTCACTTCTTGTATCAAGATGCATTCCCTTGTTACTTAGTACTTACACGGCTTCTGATAGCATCTTGTGTACAAGATTTTTGCAAGTGGTTTCCAGCTACAGAGAGAGACGTGAAGCAGATTTGGTTCAAACAGAAGTTACTTTTGGAAGTGAGAATTGTACATTTATATTACCAAAATTGCTCCTCGAGAAGAGATATGTGGTTAGTGTATGCAAAAAGCATTTTGAGATCAAAAGGACAACTGAGATTTTTAGAGGGCGTCGCTCAACAGTTGTGAGGCTCTATGATCATAGAGAATCATCTGCCATGAAGACCATTGTGCAAAATACTTTAACAGACCGCAGAGAAGACCACAACAGAATGAAACTTGCAAAAGAGATTGAAATTCTGAAGTTGTTACAACATACTCATATCATCAAGTGTATTGATGCTTTGGATTGCGGGAAAGACACCTTCCTGTTTATGGAATACATGACAGGAGGGGATCTCTCTGATCGTATTAGGCAAGCTGGTCATCTATCTGAAGACCTCGCCAAACTCTTTTTCTATCAAATTTGTCAAGGTGTGAAGTATTTGCATGAAAAGAGTGTCATTCATCGTGACATCAAGCCAGCAAATGTCCTTATGGCAACTAACAGCAAAGTTACAATAGTAAAACTAACAGACTTTGGGCTTTCCAAAGTGTTATCATCAACCGTCCACATGAAGACCGCCTGTGGCACAAAAATGTATGCTGCACCAGAATTACTGTCAGGGAAAGAAAATCGAAAGTACACTTCAAAAGTTGATATTTGGAGCCTTGGTGTGTTATTATATGTGAGCTTGTCGGGGAAAGACCCATTTGTGGAGCAGCCGCATCTCATGGAAAATCACATACGTAATGGAATCTATGTTATGGAAACTCAACAGTGGGGACATATATCAACACTAGCCAAAAATCTGATTGATGACATGATGATGACTAATCCAGATAAACGAATTAATATTGATGGGGTTGCTAGTAATATTTGGCTTAAGGTCATTATTCAGGGATTCAAGTCGTACAGGGAACAAACTGTGGTAGAACCATTTGATCCAAGGCATAATGTTGTTGGTAGCAATTCAATCGATAAGGAGGAAGTCTTCTTGCGGAGAGTCATAGGTGCAAAGAAGGACCAATATTTTCTCATTAAGAAAATGGTTCCACGATCTGATGTTATGAATTTGTTGGAGTCTGCTGGGTTTTCTCGTTCTAACCCATACTACATTGTGAAACAGGGAAAGATCAATCAGATGGCCACTGCTCCTGATTCTCAACGCTTGAAGCTTCTGCGAGAAGTTGCAGGAACAAGAGTGTATGATGAAAGGAAAGAAGAGTCCAAAGCCATACTGAAAGAGCGATTGAAGACATTAGAAGAGGAAAAAGAGGAGTTAAAGGAGTATCAAAAATGGGACAAAATGAGACGCTCATTGGAATACTGCATTCATGACCGGGAGTTAAAAGAGACACGCAAGAAACTTGAGGAGATGGAGCAGGTTAGGAAGAATTCGGGAGACGAACAGAAGAGATTTACTACGGAATTGCAGAAAGCACAGGAATCAGCACGTGTAGCCAATAAGAAACTTAAGGAAGTTAAAAAGGAAGTGCAAGCAGCCAAGGAAGAGCGAGATACTTTAAGTGCTGAACATCAGCTACTATTGAAAGAACAAGCTAAGCTCAATCTAATGATATCTGATCTCAGAGAAGAAGTTAGTGGAAATAAAGATTCCAGAGACCGCGCTGAGAAAGAGTTAGAAAAGTTGAAGAAGACTATTGAGCAGAAAGAACTGGAACTGGAGAAATTAAAACCCCAGTATGAGGAAGAGAAGAAGAAAGAAGAGGAATTCACTCGAGATCTGGCCCTCAAGGAACAAAAGCGGAAAGAGCTGTATGCTAAACAGGGAAGAGGCAGTCAGTTTACTTCAAAGGAGGAACGAGATCTGTGGATTCAGAAAGAGTTAAAATCTCTTTCAAAACAAATCAAAGACAAAATGGATCATGAAAAGAAACTGACTGATGATTTAAAGAAGGATACTGAGAAGCATGCTCTCCTCAACAAGAAAATTGAGGATCAAACCAAACAAATGGAGCAACTGAGATTAAGCATTGATGAATACAATAAGAAATACTATGAAGATAAGAAAAACAAGGATCAGCACCAAAGCAGGAGGAATGAGCTTTGGAAAAAAGAAAATCAAATCCAGCAAAATCAGTCATCTTTGAAAGAGGATTTGGCTAAAGCTGACCAACAGCTTCGATCCATGGCTGATTCAGATAAAGTAGGAACACAAATCCTGAAAGAAATGAACAAGCAGAAGTTACCTGGAGAAGTCACATTCATGCCATTAAATCGTTTGCATGTGAAGGACCAAAATTATCCAAAAACTCAGGATGCAATTCCCATGGTTTCTAAACTAAACTACAAACCGGACTATGACAAAGCTTTACGTTATGTGTTTGGAAAGACACTCATTTGTAGAAATCTTGAAGTGGCCACAAACCTTGCTAAAACGACAGGGCTTGATTGTGTTACCCTTGAAGGAGACCAAGTATCATCTAAAGGGTCCTTGACTGAAAAGGAGTTACTGTCAGTTCGAGAAGATCTTCGGAAGGAAGAGGCGGAAATCAACAAGATAGTTTCAGATATGCAGCGCACTGAGACCAAAAACAGTAAAGCAAAGGATACCTATGATCAAATCAAAGCTGAAATCCGCCTGATGAGGGAGGAAGTTGGTAGTATTGAAAGGTACAGAACATCCAAAGAAAGATCATTAGCTCAGTGTAAATCAAATTTAGAGGCTATGCAGACTACCAAGGAAGGACTGCAGTCAGAGCTTAATCAAGATTTAATGGCTCAATTATCTGTACAAGATCAGCGTCAAGTAGACAATCTGAATGATGAAATTCGTCGCCTCACACAACTGAACAAAGAGGCTTTCAGTAAACGTATGAAGCTTGAAGCTGAGAAAAACAAACTTGATAACCTTCTCACTAACAATTTAATCAGAAGAAGAGATGAATTGGTGCAAGCACTTCAGGAAATTTCAGTTGAGGACAGGAAGCGTCACCTGGATCAGAACAGTGCAGACCTTGCCTCCATCACCAAGAAGATTGAAGATGTCATGGAAACTCACAAAGAAATGGAAAAGAAAGTCCAGGCTGCTACTAAAAAGGAAAGAGCCGAAAAGGCGGAGCTAGAGAAGTTCAGGATGAAAGAAAAAGAGCTCCAAGAGAAAATGGAAGAAGATGCTAAAGACCTGGAGAAGATGACTTCCCGTCACAATTCTCTCATGCAAAAAGTTGAAGAATGTACTAAGAAGATATCAGACCTTGGCAGTTTACCTCAACCTGAAATGATCAACAAGTACATGAATCTCAGCCAAAAAGCGGTTGGTACATTGGGACACCATTTGTTTAAAGAAATGGAGAAGGCCAACACAAATCTGAAAAAATACAGTCATGTCAACAAGAAAGCTCTTGATCAATTCATGAGTTTTTCTGATCAGAAAGGGACATTGGTGAAAAGGAAAGAAGAGTTGGATCAAGGTGAGGCCAAGCTCATCATGAAAAATGCGGATGGTGAAGAAGGAACGAATCCTCGCGTGGAATCAGATTCAGATCAGTTTGCTGGAGTCTCCATTCGAGTATCATTTGTTGGGAAAAACCATGGTGAAATGAGAGAGATGAATCAGCTCTCAGGTGGTCAGAAGTCTCTGGTGGCCCTAGCGCTAATATTTGCAATCCAGAAATGTGATCCCGCTCCATTTTATCTTTTTGATGAAATTGATCAAGCTTTAGATGCTCAACACCGTAAAGCAGTTGCCGATATGATTCATGCAATGGCTGGTCAAGCCCAATTCATCACAACGACTTTCAGACCAGAACTTCTTGAACATGCCAATAAATTCTATGGAGTTAAGTTTAGAAACAAGGTGTCGCACGTGGAATGTGTATCCAGGGAAGAAGCATATGACTTTGTTGAAGATGACACAACACATGGCTAA 4227 0.4076 MAVRLRVIPNIDSEGVSCFARPGANARPQACEQQQVEQAPEWGDNWHSQSFTYRGHLTQLSKIDDTGPSLLVSRCIPLLLSTYTASDSILCTRFLQVVSSYRERREADLVQTEVTFGSENCTFILPKLLLEKRYVVSVCKKHFEIKRTTEIFRGRRSTVVRLYDHRESSAMKTIVQNTLTDRREDHNRMKLAKEIEILKLLQHTHIIKCIDALDCGKDTFLFMEYMTGGDLSDRIRQAGHLSEDLAKLFFYQICQGVKYLHEKSVIHRDIKPANVLMATNSKVTIVKLTDFGLSKVLSSTVHMKTACGTKMYAAPELLSGKENRKYTSKVDIWSLGVLLYVSLSGKDPFVEQPHLMENHIRNGIYVMETQQWGHISTLAKNLIDDMMMTNPDKRINIDGVASNIWLKVIIQGFKSYREQTVVEPFDPRHNVVGSNSIDKEEVFLRRVIGAKKDQYFLIKKMVPRSDVMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESKAILKERLKTLEEEKEELKEYQKWDKMRRSLEYCIHDRELKETRKKLEEMEQVRKNSGDEQKRFTTELQKAQESARVANKKLKEVKKEVQAAKEERDTLSAEHQLLLKEQAKLNLMISDLREEVSGNKDSRDRAEKELEKLKKTIEQKELELEKLKPQYEEEKKKEEEFTRDLALKEQKRKELYAKQGRGSQFTSKEERDLWIQKELKSLSKQIKDKMDHEKKLTDDLKKDTEKHALLNKKIEDQTKQMEQLRLSIDEYNKKYYEDKKNKDQHQSRRNELWKKENQIQQNQSSLKEDLAKADQQLRSMADSDKVGTQILKEMNKQKLPGEVTFMPLNRLHVKDQNYPKTQDAIPMVSKLNYKPDYDKALRYVFGKTLICRNLEVATNLAKTTGLDCVTLEGDQVSSKGSLTEKELLSVREDLRKEEAEINKIVSDMQRTETKNSKAKDTYDQIKAEIRLMREEVGSIERYRTSKERSLAQCKSNLEAMQTTKEGLQSELNQDLMAQLSVQDQRQVDNLNDEIRRLTQLNKEAFSKRMKLEAEKNKLDNLLTNNLIRRRDELVQALQEISVEDRKRHLDQNSADLASITKKIEDVMETHKEMEKKVQAATKKERAEKAELEKFRMKEKELQEKMEEDAKDLEKMTSRHNSLMQKVEECTKKISDLGSLPQPEMINKYMNLSQKAVGTLGHHLFKEMEKANTNLKKYSHVNKKALDQFMSFSDQKGTLVKRKEELDQGEAKLIMKNADGEEGTNPRVESDSDQFAGVSIRVSFVGKNHGEMREMNQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDAQHRKAVADMIHAMAGQAQFITTTFRPELLEHANKFYGVKFRNKVSHVECVSREEAYDFVEDDTTHG 1408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju1000315g0004 1408 Gene3D Transferase(Phosphotransferase) domain 1 231 419 - -
Alju1000315g0004 1408 ProSitePatterns Serine/Threonine protein kinases active-site signature. 265 277 IPR008271 GO:0004672|GO:0006468
Alju1000315g0004 1408 Coils Coil 561 581 - -
Alju1000315g0004 1408 Gene3D Phosphorylase Kinase; domain 1 148 230 - -
Alju1000315g0004 1408 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3 436 832 - -
Alju1000315g0004 1408 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1070 1397 IPR027417 -
Alju1000315g0004 1408 Gene3D - 1215 1407 IPR027417 -
Alju1000315g0004 1408 Coils Coil 589 630 - -
Alju1000315g0004 1408 MobiDBLite consensus disorder prediction 786 818 - -
Alju1000315g0004 1408 Coils Coil 805 825 - -
Alju1000315g0004 1408 Gene3D - 433 544 IPR027417 -
Alju1000315g0004 1408 Gene3D - 858 932 - -
Alju1000315g0004 1408 Gene3D - 831 857 - -
Alju1000315g0004 1408 Coils Coil 1105 1181 - -
Alju1000315g0004 1408 Pfam SMC proteins Flexible Hinge Domain 831 910 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Alju1000315g0004 1408 Coils Coil 515 542 - -
Alju1000315g0004 1408 Coils Coil 749 783 - -
Alju1000315g0004 1408 SMART serkin_6 145 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju1000315g0004 1408 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 436 1379 IPR027417 -
Alju1000315g0004 1408 Coils Coil 1029 1070 - -
Alju1000315g0004 1408 ProSiteProfiles Protein kinase domain profile. 145 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju1000315g0004 1408 MobiDBLite consensus disorder prediction 786 804 - -
Alju1000315g0004 1408 Coils Coil 999 1019 - -
Alju1000315g0004 1408 SUPERFAMILY Smc hinge domain 829 932 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Alju1000315g0004 1408 FunFam Structural maintenance of chromosomes 3 871 934 - -
Alju1000315g0004 1408 FunFam Maternal embryonic leucine zipper kinase 155 435 - -
Alju1000315g0004 1408 Pfam Protein kinase domain 150 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju1000315g0004 1408 Coils Coil 638 700 - -
Alju1000315g0004 1408 Pfam RecF/RecN/SMC N terminal domain 436 1387 IPR003395 -
Alju1000315g0004 1408 Coils Coil 943 984 - -
Alju1000315g0004 1408 Coils Coil 1216 1236 - -
Alju1000315g0004 1408 SUPERFAMILY Protein kinase-like (PK-like) 148 412 IPR011009 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju1000315g0004 143 408 CBL-interacting serine-threonine protein kinases AT5G35410 33.579 8.29e-38 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Alju1000315g0004 SMC_N 3.6e-12 CL0023