Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju1000304g0005 ATGAAGATCCTGGCCATCGGGGACGTGATCAGACTGAAGCAGGTGGAGCACGTCAAGAACGAGAAGAACATCCTCGCCGAGATCCGGCACCCCTTCATCGTCAACCTACGGTGGCACTGGCACGATCAGAGCTACCTCTACATGCTCTTCGACTACGTGTGCGGCGGCGAGCTGTTCAGCTACCTGCGCAACGCCGGTCGCTTCAGCAATAGCACAGTCGTTACCCTTGCCGCTCTTGCCCCCCAGGACGTGGACGCTGTGCGGCACGCCCGAGTACCTGGCCCCGGAGATCATCCAGTCCAAGGGCCACAACAAGGCGGTCGACTGGTGGGCGCTAGGCGTCCTAGTAATGGCGCGGAGGACGTCAAGAGGCACAGATGGTTCAAAGGCATCGACTGGGTTGACGTGTTCCACAGAAAACTGAAGCCACCGATCGTGCCGAGGGTTGGCTACGATGGAGACACTAGAAACTTCGACGAGTACCCCGAGGCTGACTGGAAGAACGCGCCCGTCGTGGGGGACACGGAGAGGAAGCTGTTCGAAGACTTCTAG 552 0.596 MKILAIGDVIRLKQVEHVKNEKNILAEIRHPFIVNLRWHWHDQSYLYMLFDYVCGGELFSYLRNAGRFSNSTVVTLAALAPQDVDAVRHARVPGPGDHPVQGPQQGGRLVGARRPSNGAEDVKRHRWFKGIDWVDVFHRKLKPPIVPRVGYDGDTRNFDEYPEADWKNAPVVGDTERKLFEDF 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju1000304g0005 183 Gene3D Phosphorylase Kinase; domain 1 149 160 - -
Alju1000304g0005 183 Pfam Protein kinase domain 9 75 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju1000304g0005 183 Gene3D Transferase(Phosphotransferase) domain 1 116 148 - -
Alju1000304g0005 183 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 1 78 - -
Alju1000304g0005 183 SMART pkinase_C_6 129 183 IPR000961 GO:0004674|GO:0005524|GO:0006468
Alju1000304g0005 183 Gene3D Phosphorylase Kinase; domain 1 1 88 - -
Alju1000304g0005 183 MobiDBLite consensus disorder prediction 93 116 - -
Alju1000304g0005 183 SUPERFAMILY Protein kinase-like (PK-like) 1 77 IPR011009 -
Alju1000304g0005 183 ProSiteProfiles AGC-kinase C-terminal domain profile. 129 183 IPR000961 GO:0004674|GO:0005524|GO:0006468
Alju1000304g0005 183 ProSiteProfiles Protein kinase domain profile. 1 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju1000304g0005 1 62 AGC Kinase Gene Family AT1G30640 43.548 2.10e-12 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PKA-PKG Alju1000304g0005 Pkinase 3.6e-09 CL0016