Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju1000252g0013 ATGGATGTTATGGATCCTGGCTTGGACACGAGGATGTTCAGATGTGGACGATCCCTCATGGACAAAGATGAAATCCAAGTGATAGCTTCACAGAGTTTAACAATTGTTGATGATGACACATCTCTTGGATCTTCAGAGGATCATGCTGCTGTGGCAGGACTCGCCCACAGTACATTAACCACCTATAGGGTGGTTCAGGTAGGTGACTCAGATCAGTTACCTCAAATTGTGACATCGCCAGCATATTCACGCAACAGTAGCTCAGTTCCCCAAGCTGTTCTTGCCAGCAGTCCTATTAATGGGCAGTTCTATGTCATTGGCTCACCTCAAGAAGTTTTTGGCACCACTCAAGTCCAACGTTCCCTAGCTCCTAGACTGAGTTCTAGCCTTGAAGGTGGAACCAGAGCAATTCGGGATGACAAGCGAAGAGCAACACACAATGAAGTGGAGAGACGAAGAAGAGATAAAATAAATACCTGGATTGTGGAACTTAGCAAGATTGTTCCTGACTGTGTACCAGAAACAACAAAAAGTTCTGGCCAGTGGAAACTAGATGTTGAGTGA 564 0.4539 MDVMDPGLDTRMFRCGRSLMDKDEIQVIASQSLTIVDDDTSLGSSEDHAAVAGLAHSTLTTYRVVQVGDSDQLPQIVTSPAYSRNSSSVPQAVLASSPINGQFYVIGSPQEVFGTTQVQRSLAPRLSSSLEGGTRAIRDDKRRATHNEVERRRRDKINTWIVELSKIVPDCVPETTKSSGQWKLDVE 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju1000252g0013 187 Gene3D - 138 186 IPR036638 GO:0046983
Alju1000252g0013 187 Pfam Helix-loop-helix DNA-binding domain 142 178 IPR011598 GO:0046983
Alju1000252g0013 187 PANTHER FI24210P1 76 179 - -
Alju1000252g0013 187 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 139 175 IPR036638 GO:0046983
Alju1000252g0013 187 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 141 187 IPR011598 GO:0046983
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju1000252g0013 HLH 1.4e-11 No_clan